| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0383 |
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| Symbol | |
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| ID | 5452719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 416781 |
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| End bp | 417482 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640874132 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_001409905 |
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| Protein GI | 154249080 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGAATA AGGAAATGGT TATACAAGAG TACATTCCAA TGGTAACAAA AATTGCTCGT
GATTTAAAGA TTAATTTACC GTACAACGTT GAGATAGATG ATCTTATTCA AGAAGGTGTT
ATAGCACTTT TACAAGCAGC TGAAAAGTAT GATCCAAGGT ATGGCGCAAC TTTTAAAACA
TTTGCTTACA CAAGAGTGAA AGGTGCTATG ATTGACTACC TTAGAAAGCT TGATTACTTG
CCAAAGAATG TAAGACAGGA TATCAAAAAA TTTGATAGAG AACTTTTGAA CTTTTATGAG
CAAAATAAAA GATTACCAAC TTACGATGAA ATGTCAGAAA TTCTTGGAAT AGATGTAGAA
GAAGTTGAGG AGATTTACAG GGAACTTGCT TTAAAGCAAA GTCTGAATCT TGACCAATAT
CTCTTTGAAT CAGATGAAAA CTCATATGGA AGTATCGATA TAAAAAGCGA AGAAAACGTT
AAAGAAAATG CTTGGAAGTC CATACTTCAT GAACAATTAG TTGAGGCGAT AAATAAATTA
GATGAAAAAG AAAAGATAAT ATTAAGTATG AGATTTGAAC ACGAACTATC TTTAAAGGAA
ATTGCGGAAG TTCTTGGAGT TACCGAATCT CGTGTATCCC AAATTCTTGG TGTCATACTT
AGTAAGCTCC GCAAAATGCT TAGAGGTGAT GAGGATGGCT GA
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| Protein sequence | MLNKEMVIQE YIPMVTKIAR DLKINLPYNV EIDDLIQEGV IALLQAAEKY DPRYGATFKT
FAYTRVKGAM IDYLRKLDYL PKNVRQDIKK FDRELLNFYE QNKRLPTYDE MSEILGIDVE
EVEEIYRELA LKQSLNLDQY LFESDENSYG SIDIKSEENV KENAWKSILH EQLVEAINKL
DEKEKIILSM RFEHELSLKE IAEVLGVTES RVSQILGVIL SKLRKMLRGD EDG
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