Gene Fnod_0382 details

Gene Information

• Locus tag: Fnod_0382
• ID: 5451950
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 416302
• End bp: 416781
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640874131
• Product: chemoreceptor glutamine deamidase CheD
• Protein accession: YP_001409904
• Protein GI: 154249079
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA AGGTTATAAT CGGTATCGGA GAATGGGCAG TAGAAAAGAA TCCCTCCATC 
TTGGTAACAC TCGGACTTGG ATCTTGTGTA GGAGTTTGCG TTAGGGACCC GATTGCAAAG 
GTTGGAGCAA TGGTACATGT CATGTTACCA GATAGTGGAG GTAAACCGAC AAATACTCCA 
GGTAAATTCG CCGATACAGG TGTGGATATA ATAGTTGAGG AATTACTGAA AATGGGAGCC 
CAGAGAAATA GATTAGAGGC AAAGATAGCG GGTGGAGCTT CCATGTTCCA ATCTGCAATG 
GATATTGGTG CAAGAAACGT TGAGGCAGTA AAAAAATCTT TACAAAGAAA TGGGATAAAG 
CTCATTGCTG AAGACACTGG TGGTAACAAA GCAAGAAGTA TCGAATATGA TATAGAAACA 
GGAAAACTTT TGGTTAGAAA AGTTAAAACA GGCGATGCTG TGGAGGTTTC TGAAATCTGA 

 

Protein sequence

MKKKVIIGIG EWAVEKNPSI LVTLGLGSCV GVCVRDPIAK VGAMVHVMLP DSGGKPTNTP 
GKFADTGVDI IVEELLKMGA QRNRLEAKIA GGASMFQSAM DIGARNVEAV KKSLQRNGIK 
LIAEDTGGNK ARSIEYDIET GKLLVRKVKT GDAVEVSEI