| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0368 |
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| Symbol | |
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| ID | 5452993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 402742 |
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| End bp | 403710 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874117 |
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| Product | dihydrouridine synthase DuS |
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| Protein accession | YP_001409890 |
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| Protein GI | 154249065 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGG CTAATTTTTT ACCTGGTAAT ATAGGCTTAG CGCCGATGGC TGGTGTAACA
GATTATCCGT TTAGAAAATT GTGCTTACAA CATGGCGCGT ACTTTGCCTT CACTGAGATG
ATAAGTGCTA AGAGTGTAAT TATTAATGTT AAAATAAATG AAATTTACTT TCCAAGACAA
GACGAAAAAG ATAGAGTTGG TGTACAGTTA TTTGGTTCAG ATTACGCAGA ATTATCTGAA
GCGGCGGCTA TAGTTCAAGA GAAAGGGCTA TGGGTAGATT TGAATGCCGG ATGTCCTGTT
AGTAAAGTGA TAAAAAAAGG TGCAGGAAGC GCACTGTTAA AAGATCTTGG AGAATTTAGA
AAAGTTGTCA GGGCTATGCG TTCGGTCCTA AAAAGATTTA CCGTGAAAAC CCGTATAGGT
TGGGAAAAAG ACGAATTTGA GAAGATATAC AATATCTTAC TTGAAGAAAA TGTGGATGCA
GTATTTGTTC ACGGAAGAAC GGCAAAACAA ATGTACTCAG GAAAGGCAAC TTGGAAAATT
TATAATCCTG GCTTTGTACC TTTGTATATA AGTGGTGATA TTTATACGAA AGAAGATATA
AAAAATGCAA TGGAACAAAG CGGGGCAACA GGTGTTATAG TTGCAAGAGG AAGTATCGGT
AACCCTTGGA TATTCAGTGA AATAGGCGAA CCAAATTGTG AGCAAAGATT ATGTACTATT
CTAAAACATT TGGAATATTT ATACGATGAA TACAAAGACT ACGGTGCAGT TGTATTTAGA
AAATTTGTTG CAGGATACAC AAAAAATATG CTAGGAGCCC GTGATTTTAG AGATAAGGTT
ATGAAAATAA GGAAATTGGA AGAATTATCA TCAGAATTTC AAAAATTTTT CTATGAAAAT
TGTTATAAAC AAGGATTTAG AAAGGAGCAA AAAATAAGTG ATATACTTAA TCAGACATGC
GGTAACTGA
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| Protein sequence | MSKANFLPGN IGLAPMAGVT DYPFRKLCLQ HGAYFAFTEM ISAKSVIINV KINEIYFPRQ
DEKDRVGVQL FGSDYAELSE AAAIVQEKGL WVDLNAGCPV SKVIKKGAGS ALLKDLGEFR
KVVRAMRSVL KRFTVKTRIG WEKDEFEKIY NILLEENVDA VFVHGRTAKQ MYSGKATWKI
YNPGFVPLYI SGDIYTKEDI KNAMEQSGAT GVIVARGSIG NPWIFSEIGE PNCEQRLCTI
LKHLEYLYDE YKDYGAVVFR KFVAGYTKNM LGARDFRDKV MKIRKLEELS SEFQKFFYEN
CYKQGFRKEQ KISDILNQTC GN
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