Gene Fnod_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0350 
Symbol 
ID5452660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp380384 
End bp381061 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content33% 
IMG OID640874096 
Productdeoxyribonuclease V 
Protein accessionYP_001409872 
Protein GI154249047 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.34523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAATG AATTTATCAG TGAAGAGTTA ATCCAAAAAT TAAAAAAAGA ACAGAACAAT 
CTGAGACAAA AAGTTACCAT AACAGAACTT GATATATCTA AAATAAATAT CATTGCCGGT
GTTGACGTAA GCTATTTTGA AGACAAAGCT CTTGGTGTAG TTGTAGTATT AAATAAAGAT
TTAGAACTTA TCGATGTTGT TTATAGTATA GATAAAGTAA CTTTTCCTTA CATACCAGGT
TTTCTTGCTT TTAGAGAAGC ACCTATTATT TTTAAATGCT TTGAAAAGCT GAGAGAAAAG
AATATAGTCC CAGATATAGT TTTATTTGAC GGACATGGAA TTGCACATCC ACGCGGTTTG
GGAATAGCAA GTCACATAGG TGTGCTTCTT AATATCCCAA CAATAGGAGT GGCCAAAAGA
AAACTTTATG GCAAATGCGT CGAACCTAAG CGCGTTGGTC AATCTACACC TTTATTTGAT
GAAGAAGGCA AAATAATTGG ATACTGTTAC CTTCCAAAGA AAAATTCCCA TCCTATCTAT
ATCTCGCCAG GTCATCTTTC CAGTCCTGAA ACTTCTTTAG AATTCGTTAA AAGCCTGATT
AAGAAACACA AACTTCCAGA ACCCACAAGG TTGGCACATT ACTATACTCA AAAATTAAAA
GAAAACAAAA ATATTTAA
 
Protein sequence
MRNEFISEEL IQKLKKEQNN LRQKVTITEL DISKINIIAG VDVSYFEDKA LGVVVVLNKD 
LELIDVVYSI DKVTFPYIPG FLAFREAPII FKCFEKLREK NIVPDIVLFD GHGIAHPRGL
GIASHIGVLL NIPTIGVAKR KLYGKCVEPK RVGQSTPLFD EEGKIIGYCY LPKKNSHPIY
ISPGHLSSPE TSLEFVKSLI KKHKLPEPTR LAHYYTQKLK ENKNI