Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0350 |
Symbol | |
ID | 5452660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 380384 |
End bp | 381061 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640874096 |
Product | deoxyribonuclease V |
Protein accession | YP_001409872 |
Protein GI | 154249047 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.34523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGAATG AATTTATCAG TGAAGAGTTA ATCCAAAAAT TAAAAAAAGA ACAGAACAAT CTGAGACAAA AAGTTACCAT AACAGAACTT GATATATCTA AAATAAATAT CATTGCCGGT GTTGACGTAA GCTATTTTGA AGACAAAGCT CTTGGTGTAG TTGTAGTATT AAATAAAGAT TTAGAACTTA TCGATGTTGT TTATAGTATA GATAAAGTAA CTTTTCCTTA CATACCAGGT TTTCTTGCTT TTAGAGAAGC ACCTATTATT TTTAAATGCT TTGAAAAGCT GAGAGAAAAG AATATAGTCC CAGATATAGT TTTATTTGAC GGACATGGAA TTGCACATCC ACGCGGTTTG GGAATAGCAA GTCACATAGG TGTGCTTCTT AATATCCCAA CAATAGGAGT GGCCAAAAGA AAACTTTATG GCAAATGCGT CGAACCTAAG CGCGTTGGTC AATCTACACC TTTATTTGAT GAAGAAGGCA AAATAATTGG ATACTGTTAC CTTCCAAAGA AAAATTCCCA TCCTATCTAT ATCTCGCCAG GTCATCTTTC CAGTCCTGAA ACTTCTTTAG AATTCGTTAA AAGCCTGATT AAGAAACACA AACTTCCAGA ACCCACAAGG TTGGCACATT ACTATACTCA AAAATTAAAA GAAAACAAAA ATATTTAA
|
Protein sequence | MRNEFISEEL IQKLKKEQNN LRQKVTITEL DISKINIIAG VDVSYFEDKA LGVVVVLNKD LELIDVVYSI DKVTFPYIPG FLAFREAPII FKCFEKLREK NIVPDIVLFD GHGIAHPRGL GIASHIGVLL NIPTIGVAKR KLYGKCVEPK RVGQSTPLFD EEGKIIGYCY LPKKNSHPIY ISPGHLSSPE TSLEFVKSLI KKHKLPEPTR LAHYYTQKLK ENKNI
|
| |