| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0340 |
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| Symbol | |
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| ID | 5453315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 367792 |
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| End bp | 369132 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640874086 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001409862 |
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| Protein GI | 154249037 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0121257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA ATGTCAATAC TATATATATA GAAAAATGGG CTTATGGTGG TTACGGCCTA
GGCAAATTGC CAGGTGGGAA ATTGATATTT GTTGAAGGGG CTTACCCGGG AGAGTTGGTA
AATGTCAAAA TAACAGAAGA AAAAAGCGAT GTTGCGTTTG GAAAGGTGGA GGAAATATTA
GAACGAGCTA ATTACAGAAG AGTTCCTAAA TGTAAATATT TTGGTGTCTG TGGTGGATGC
CATATAATGG ATATTGACTA CAAAAAGCAA CTTGAATTAA AAAGGGAAGT TGTTGTTGAC
CAACTCAAGA GAATTGCAAA ATTTGATGGA AAAGTTAGCG ATACAATTGA AAGCGATATC
GAGTTTGGCT ATAGAAACAA GATGGAATAT ACTTTTACTT ATGAAAATAA TAAAGTCAAG
CTTGGATTAA AAATGAGAAA TTCAAATAAG GTAGTCGATA TAGATGATTG CCCAATTTCG
CCAACTTCGT TTAACAAAGC GCTGCAAGAA ATACCAGAAA TAGTTGAGAT AAGCAAAGTA
AAGATATACA ATCCTAAAAG TCGTGCTGGA ACTCTAAAGC ACTTGGTTAT GAGATATTCT
CATTCAAATA ATCAAACAAT GGCAATTTTT GTAACGAAAA CCGAAAGATT CGAAGAAGCA
GAATTCATAC GCACTCAAAT TTTAAATAGA ATTCCTCAAA TTAACTCAAT TATCCACGTT
ATGAATTCAT CAGATGAGAT AGTACTCAGA GGACCGTATA AAACTTTATA TGGTTCTGGT
GTACTTGAAG TAGAAATGGA CTATGAAAAA TTTCAAATTC CACCGACAGC TTTCTTTCAG
AACAACTACA ATGTTGCGGT AAAGATGGTA GATTTTGTAA CCAAAAATCT AAATTTAACA
GGTTCGGAAA ATATTTTAGA CCTTTACGCT GGTATAGGAA CGTTCACTAT GCGGCTCGCA
ATGCTTTCAA GAAATGTTGT TGCCGTTGAG AGTTCGCATA TATCTGTTAA AGCGGGGAAA
GCGAATGCAA ACATAAACAA TTTAAGGAAC ATAAGATACG AAGAATCTGA CGTTGTAGAA
TTTTTGAAAT CGTACACAGG AAATGCAGAT ATAATTATTC TTGACCCACC AAGAAGTGGT
GCGGGAAAAG AAGTATGTAA AGAAATATTA CGTATTAAAC CTCACAAAAT AGCTTACATT
TCTTGTGATT CTTCAACACT TGCAAGGGAT ATAGCATTGT TAAAAGAAGA CTATAACATA
ATTGCAGTAC AACCGTTTGA TATGTTCCCA CAAACTTATC ATGTTGAGAC TGTAGTTTTG
ATGGAAAGAA AAGAAAGATA A
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| Protein sequence | MSENVNTIYI EKWAYGGYGL GKLPGGKLIF VEGAYPGELV NVKITEEKSD VAFGKVEEIL
ERANYRRVPK CKYFGVCGGC HIMDIDYKKQ LELKREVVVD QLKRIAKFDG KVSDTIESDI
EFGYRNKMEY TFTYENNKVK LGLKMRNSNK VVDIDDCPIS PTSFNKALQE IPEIVEISKV
KIYNPKSRAG TLKHLVMRYS HSNNQTMAIF VTKTERFEEA EFIRTQILNR IPQINSIIHV
MNSSDEIVLR GPYKTLYGSG VLEVEMDYEK FQIPPTAFFQ NNYNVAVKMV DFVTKNLNLT
GSENILDLYA GIGTFTMRLA MLSRNVVAVE SSHISVKAGK ANANINNLRN IRYEESDVVE
FLKSYTGNAD IIILDPPRSG AGKEVCKEIL RIKPHKIAYI SCDSSTLARD IALLKEDYNI
IAVQPFDMFP QTYHVETVVL MERKER
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