| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0336 |
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| Symbol | |
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| ID | 5452037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 360947 |
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| End bp | 363916 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874082 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001409858 |
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| Protein GI | 154249033 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATGGG AATTAAGGCA GGTAGATGAA CACCTTGTTC AAGAACTCTC TGAAAGGCTG
GGTGTAAATA AGTTCGTTGC AAAGTTATTG GTACTGCGTG GTATAAAAAC AGAAGAAGAT
GCCAAAAGAT TTCTTAATCC AACGCGTCAA ACACTACGTT CTCCATTTTT ATTAAAAGAC
ATGGAGAAAG CCGTTGAAAT ATTGTTAAGA GCAAGAGACA ACGGCGAGAA AGTTATAATC
CACGGCGATT ATGACGTGGA TGGTATTACT GGTACGGCTG TACTTTACAC TTTTCTTTCA
GAAAATGGAT GGAACGTAGA TTACTACATT CCAAAGCGTG TGGATAATGG TTACGGTATT
CAACCACAAT TTGTCGAAGA GATTGTTCTA AAGGGATTCA AAACAATCTT AACGGTAGAT
TGTGGCATAA CCGCTTTTGA AGCCGTTGAT AAGGCTAAGG AACTTGGTCT AAACATTGTT
ATAACAGATC ATCACCAACC AAAAGAAACC CTTCCTAACG CCGATGCGAT TGTTAATCCA
AAAAGACCAG ACGACGAATA TCCTTTCAAG GAATTTGCAG GAGTAGGAGT CGCCTACAAA
CTTATTACCG CACTAGCAGA AAAAATGAAT ATCCCACCAT CTGTAACCGA TGAATTGTTA
GATTTAGTTG CCCTTGGTAC AGTTGCAGAT ATGGTTGAAC TTTTAGACGA AAATAGGTAC
ATTGTTCGAG AAGGCCTAAA AAGGCTTAAC AATACAGCTA AACTCGGCAT TGTTCGACTT
ATTCAAAAAA TAGGTATTGC CACGATAAGT ACGCGCGATA TTGGTTATAG AATCGCTCCA
AAACTTAATG CAGCTGGCAG GCTCGATTCT CCTGATGATG CATTTAAACT GATAGTCACC
AAAGATGAGG CAAGTGCGAC TGAGCTTGTA GAGATTTTGT TAGGATATAA TGTAACAAGG
CAGGGTATCG AAGCAAAAAT ATATAACGAA GCTGTACAGA TGATTGAATC AAATAACCTT
GATAGTTTAC CAATAGTTGT TGCTTACGGT TATGGATGGC ATCTTGGTGT TATAGGGATA
GTCGCCACAA GACTTGTGCA TTTGTATAAC AAACCTGTTA TGGTGATATC CATCGAAGAT
GGAGTAGGAA GAGGTTCTGC TAGGAGTGTT CAAGGTGTTA ACATAATAGA ATTACTTGAA
AGATTTAGAG ATATATTTGA AGATTTTGGT GGGCACACAA TGGCACTTGG TTTCAGCTTG
AAAGAAGAAA AAATTCCAGA GCTGATAAAA GCAATACGCG AAAAAATAAG AGAAGAAGAT
ATAAAAGTAG AAGAAGTAAT TGCCGTAGAT GAAAAAATAT CTGTAGATGA AATAAATGAA
GATTTATTAA AATCAATAGA ATTATTAGAG CCATACGGAC ATGGTAATCC TGAGCCAGTA
TTTTTAATAC AAAACAGCCC AGTTGAACGA TTTAAAATCT TTGGTGAAAC AGGTTACAAC
ATTCGATTAA CTCTAAAAGG TAATAGCAAT AGCATAGAAG GTGTAGGGTT TGGACTAAAA
TTCTCACCAA ATGAAATGTA TGGTATTCAA CCACAATTTA TACGAATGGA CGTTGTTGGC
AACTTAAGGA CTGGAGAAGC TGGTCCTCAG CTTAATGTTT TGGATTTAAA ATTTTATCAT
ATAAGTGATG ATGATGTTAT GGATAGAGCC TTTTTGCATT CATTTAGCGT GAACTGGAAA
CAACAGAAAG AAGAAGAGTA CAGTCAAAAA CATATAGAAG ATGATATATT CTCCAGAATT
GAAAAAGTAA GCAATTTATA CAAAATACAA AGACCAGCGG TTATAAGATT TAAAATGCAC
TTTAGGAATG CATTTTTGTA CGATTTAATG AGAAAAGGAA GAGTATTAAT TATAAATTCA
TCAAGTATCG AGGCCATGCA TATCTATGAA AGTTTACAGA GACATAACAT ACAAGGCTTG
GTACTACTTA ATTCTGTTAA CAGAAGTAAT GGAAGGCACA TTGTGACGAA TGCGGTATAT
GCCGATAAGT TCATTTCCAG CTTAGATGAT TTTGATTTTG TAGTTTTAAA CGAAATTCAT
TTCTTGAGAA ATTTTGACGA AAACCTATTT GAAAGGATAA TTTATAAATT TGGTAAGCAA
GCATTTTACA CAACAATATT TAATTTCGAA ACCAATCTTC CAATTTATGA AGTTGAAGGT
AAATCTGAAT TCTCAATAGA AGATAAGAGA AATCAGCCAA AGTCTCTCAA CAATACTGTT
TCTTCACTTG TTTATCTATT TTCAACGCAT AACTCTGTAG AAATTTTCTT CAACAATTAC
GTAAAAAAGA TGTCCGCTCG AGATACGGTC TTTTACTCTT CACAGCTTGC CCCATTCCAA
AGACTAATTA TATCCAATCT TGTAAAGAAA AGAAAAATAA AGAGGCTTAT TTCTTCAACG
AATACAGATG GATTACCTGG TTTATTTGGA AAGGTCGAAG TGAGACTCTT TGACTTCCCT
TATACTCTGA GTGAAATAAT TGACGCAGTG AGCGGAGATG GAAATGTGCT GCTGCAGTTA
AATTATTCAA CACAAGACGT GAATAAAAGA TACGAATCAT TGAAAAAATT ATTCCCCACG
CTTGAAAACT TGGAAAAGAT AGTTGAAGAA TTAAATATAT ATCTTCCGAT GAAACAAGAT
GATTTTGAGG CTATATTATC AAATTACGAT ATACCAAAGG GGGTTGTAAA GAGCATTTAC
AAAGATCTCG GCGGAATAGT TGAAAATATA GTTAAACCTG TTGATTTTAT TCCAGAAAAA
ATAACAAGGC TTAAAGAAAG AGAAATTGAA TTACCTTATT TTGAAAGATA CACTCTTCAA
CTCGAGGCCT TATCTATGAA AGAAATATAC AGACTGATAG AGGAGAGATA TATGCATGAC
TCAGAACTTA AAATATATTT TAAGGACTGA
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| Protein sequence | MRWELRQVDE HLVQELSERL GVNKFVAKLL VLRGIKTEED AKRFLNPTRQ TLRSPFLLKD
MEKAVEILLR ARDNGEKVII HGDYDVDGIT GTAVLYTFLS ENGWNVDYYI PKRVDNGYGI
QPQFVEEIVL KGFKTILTVD CGITAFEAVD KAKELGLNIV ITDHHQPKET LPNADAIVNP
KRPDDEYPFK EFAGVGVAYK LITALAEKMN IPPSVTDELL DLVALGTVAD MVELLDENRY
IVREGLKRLN NTAKLGIVRL IQKIGIATIS TRDIGYRIAP KLNAAGRLDS PDDAFKLIVT
KDEASATELV EILLGYNVTR QGIEAKIYNE AVQMIESNNL DSLPIVVAYG YGWHLGVIGI
VATRLVHLYN KPVMVISIED GVGRGSARSV QGVNIIELLE RFRDIFEDFG GHTMALGFSL
KEEKIPELIK AIREKIREED IKVEEVIAVD EKISVDEINE DLLKSIELLE PYGHGNPEPV
FLIQNSPVER FKIFGETGYN IRLTLKGNSN SIEGVGFGLK FSPNEMYGIQ PQFIRMDVVG
NLRTGEAGPQ LNVLDLKFYH ISDDDVMDRA FLHSFSVNWK QQKEEEYSQK HIEDDIFSRI
EKVSNLYKIQ RPAVIRFKMH FRNAFLYDLM RKGRVLIINS SSIEAMHIYE SLQRHNIQGL
VLLNSVNRSN GRHIVTNAVY ADKFISSLDD FDFVVLNEIH FLRNFDENLF ERIIYKFGKQ
AFYTTIFNFE TNLPIYEVEG KSEFSIEDKR NQPKSLNNTV SSLVYLFSTH NSVEIFFNNY
VKKMSARDTV FYSSQLAPFQ RLIISNLVKK RKIKRLISST NTDGLPGLFG KVEVRLFDFP
YTLSEIIDAV SGDGNVLLQL NYSTQDVNKR YESLKKLFPT LENLEKIVEE LNIYLPMKQD
DFEAILSNYD IPKGVVKSIY KDLGGIVENI VKPVDFIPEK ITRLKEREIE LPYFERYTLQ
LEALSMKEIY RLIEERYMHD SELKIYFKD
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