| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0300 |
|---|
| Symbol | |
|---|
| ID | 5452159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 326165 |
|---|
| End bp | 327337 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640874045 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001409822 |
|---|
| Protein GI | 154248997 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3864] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA TTGAAAAAAA ATTAGATAAT GTTTTGGCCA ATTTAATAAA AATTAACTCA
TTTTATGCGT ATATTCTCAT GGGAAGTAAA TTCAAAGAAG CAAATGTAAA AAACATAAAG
CTTACTATTA CAAGAAATGG GGATTTTTTA TTTTTATACA ATCCTGTGAG TGTAAAAATT
AAATCTGAAA TATTTTTTGA AGGGTTGATA TTACACGAAT TGATGCATTT CATAAATAGG
CATTACTTGA TAAAACCAAA AGATAAACGA GATAAAGCTA TATGGAACCT TGCTCAAGAT
GCTGCTATTA ACCAATTTAT TCCGCAACTT GATGCACTTA GTGTTCCTCT AAATGTTTTG
ATAGAAGAAG GACATGGCGC AGATAACGAC GTTATATTTG TTGGTCCACC AGCTAATATG
TTGAATAGAA CCGCTGAAGA GTATCATGAC TACATAATAG AGGAATTTTT AAAGAAGGGA
AATTACGATA TAGAAGCAAT TGCAGAAAAG TTGCCACAAA ATCATGAGAT AGAAAGTGAT
ATACCAACTG ACATGATTGT TGAACTAGTC CAGCAGAAGG TTGGCAAAGC TTTTAATCTT
TTTGGAAAAG AACTTCCATC TGGTTTAAGG CAAGATATTG AAATATTTAT ATCTAAACCT
GTTATAAATT GGGAAGTGGC AATTAGAAGA TTCGCTGGAC TATCACAAAA AGGAGATAAA
TATTCTACAC CTCTGAGACC TAATAGAAGA TACGATGATC AACCTGGATG GAGGTATATC
TACGACCCCA AACTAACTGT AATAATTGAC ACAAGTGGAA GTATAATAGA AGAAGAGCTA
AATGCTTTTA TGTCAGAAAT AGAGAGTTTA GCCCGATTGG GTGTCGAATT AAATGTTATC
CAAGTAGATA AGTCAGTTAC ATTCGTTGGA AAATACAAGA GAGGAGAATG GAAGAATTTC
GAAGTTTACG GCGGTGGTGA AACTGACTTA CAACCCGCTG TAGATATAGC CCAAAAAGAT
TTCAGAAGTG AAGGTATAAT AATATTCACA GATGGTTATG TTGACCTTCC AAAAGTCGAT
AGAAGAGTTC TTTTTGTACT TAGTAAAAAG CACAATCCAG AATTTTACAT CGATACTAAA
AAAATATACG GCAATGTCTA CGTTCTAAGT TGA
|
|---|
| Protein sequence | MSDIEKKLDN VLANLIKINS FYAYILMGSK FKEANVKNIK LTITRNGDFL FLYNPVSVKI
KSEIFFEGLI LHELMHFINR HYLIKPKDKR DKAIWNLAQD AAINQFIPQL DALSVPLNVL
IEEGHGADND VIFVGPPANM LNRTAEEYHD YIIEEFLKKG NYDIEAIAEK LPQNHEIESD
IPTDMIVELV QQKVGKAFNL FGKELPSGLR QDIEIFISKP VINWEVAIRR FAGLSQKGDK
YSTPLRPNRR YDDQPGWRYI YDPKLTVIID TSGSIIEEEL NAFMSEIESL ARLGVELNVI
QVDKSVTFVG KYKRGEWKNF EVYGGGETDL QPAVDIAQKD FRSEGIIIFT DGYVDLPKVD
RRVLFVLSKK HNPEFYIDTK KIYGNVYVLS
|
|---|
| |