Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0293 |
Symbol | |
ID | 5452147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 314071 |
End bp | 314961 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640874039 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001409816 |
Protein GI | 154248991 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA ATACAAAAAG ACGCTCAAAT CACTGGTTAT TACTATCACC ATATCTAACT CTCTTCACGA TATTTATTGT TTTACCAGTT ATTATTGCAA TTTTCTTGTC TTTTACATAT TTCAATGCGA TAGAAAAACC GCGATGGATC GGGATACAAA ATTACATTAC ACTAATAACA CGCGATGATA TCTTCATGCA AAAGGTTTTG CCAAACACTA TTAAATACGC CCTTATCGTT GGAGTAGGCG GGTATATACT TTCTTTCATA CTTGCTTGGT TAGTTGCTCA GTTGACAAAA GTGCCAAGGA CTATATTCGC TTTGATTTTG TACTCTCCAT CACTTACAGC TGGCGTAACA ATGGCAGTTG TCTGGCGAGT TTTATTCAAT GGTGACCAGC AAGGATATCT TAATGCTTTA TTGTTGAACC TTGGAATAAT AGATAAGCCT ATTCAATGGC TACAATCACC TCAACATCTT ATGGATATAA TGATCTTGGT ATCTTTGTGG AGTAGTATGG GGGTTGGATT TCTTGCAATG CTTGCAGGTA TATTGAATAT CGATGAACAA CTCTATGAAG CTGCGTACAT AGATGGAATA AAAAATAGAT TACAAGAGAT AATTTATGTA ACTATACCTG CTATGAAACC ACAGATGTTG TTCGGTGCGG TTATGTCCAT AGTAAATACA TTCACTTCTG CGGGCATAGG TGTCGCACTC TCGGGTTCGA ACCCAACACC ACAGTACGCT GGACAACTTA TCGTGAATCA CATTGAAGAT TATGGATTCT TACGGTACGA AATGGGATAC GCTGCGGCAT TGTCAGTTGT ATTACTACTG ATAATCTGGT TTTTCTCACG TATAGCCTGG CGCTTGTTTG GCGAAAGATA A
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Protein sequence | MKNNTKRRSN HWLLLSPYLT LFTIFIVLPV IIAIFLSFTY FNAIEKPRWI GIQNYITLIT RDDIFMQKVL PNTIKYALIV GVGGYILSFI LAWLVAQLTK VPRTIFALIL YSPSLTAGVT MAVVWRVLFN GDQQGYLNAL LLNLGIIDKP IQWLQSPQHL MDIMILVSLW SSMGVGFLAM LAGILNIDEQ LYEAAYIDGI KNRLQEIIYV TIPAMKPQML FGAVMSIVNT FTSAGIGVAL SGSNPTPQYA GQLIVNHIED YGFLRYEMGY AAALSVVLLL IIWFFSRIAW RLFGER
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