Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0286 |
Symbol | |
ID | 5453251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 304021 |
End bp | 304869 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640874032 |
Product | glucan endo-1,3-beta-D-glucosidase |
Protein accession | YP_001409809 |
Protein GI | 154248984 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGAAA AGTTGCTGTT ATTAATTATG GTTTTATTAG TACTTCTTTC TACAGTTGGT TGTTCTTTCA CAAAGGAGGA ATATGCGTTG TTAAAAAGCG ATAAATGGAA ATTAATCTGG TCTGATGAAT TTAATGGAAA AGAGGTAGAT AGAACAAAAT GGAACTTCCA AATTGGAAAT AACAACGGTT GGGGTAACGG TGAATGGCAG TACTATACAG ATGGAAAAAA CGCGTGGATA GAAAACGGGA TGCTTGTTAT CGAAGCAAGA AAAGAAGTTG TAAAAGACTC AAAAGGTACA TATAATTACA CTTCAACGAG GATGACAACG GAAAATAAAT TCAGTATCCA ATACGGAAAA ATAGAGGCAA GATTAAAATT TCCTCAAGGT AAAGGACTCT GGCCAGCATT TTGGATGCTT GGTGAGAATT TCAGGTACGT AGGCTGGCCT ACCTGCGGTG AAATAGATAT AGTTGAATTT CTTGGTCACG ATAAAAAGAC AGTTTATGGA ACAATGCATG GACCTGGGTA CAGCGGAAGT TACGGAATTA GTGGAAAATA TATGATTGAT GTAACTACCA AACCATCTTT TGTTGATGAT TTCCATGTAT TCGGCATTAT TTGGGATGAA GAAAAGATAA TATGGTACGT TGACGATGAA ATATACCATG CGGTTTACAA AAAAGCCATA GAAAATCGTG GAAAAGTTTG GGTCTTTGAT AATCCATTCT TTATCATACT GAATCTTGCC GTAGGTGGCT ATTGGCCAGG TTATCCAGAT AATACAACAC CCTTCCCGGC CAGATTTTAC ATTGATTATG TAAGAGTGTA TACATTAGAT GAAGAGTAA
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Protein sequence | MREKLLLLIM VLLVLLSTVG CSFTKEEYAL LKSDKWKLIW SDEFNGKEVD RTKWNFQIGN NNGWGNGEWQ YYTDGKNAWI ENGMLVIEAR KEVVKDSKGT YNYTSTRMTT ENKFSIQYGK IEARLKFPQG KGLWPAFWML GENFRYVGWP TCGEIDIVEF LGHDKKTVYG TMHGPGYSGS YGISGKYMID VTTKPSFVDD FHVFGIIWDE EKIIWYVDDE IYHAVYKKAI ENRGKVWVFD NPFFIILNLA VGGYWPGYPD NTTPFPARFY IDYVRVYTLD EE
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