| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0285 |
|---|
| Symbol | |
|---|
| ID | 5453319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 302992 |
|---|
| End bp | 304005 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640874031 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_001409808 |
|---|
| Protein GI | 154248983 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAAATA TACGCGAGGT CGCTAAGCTA GCTAATGTAT CAATAGCAAC CGTTTCAAGG
GTTTTAAATG GAAGCGACAG AGTTTCCGAG GAAACAAGAA AGCGAGTTTT AAACGCGGTG
AAAAAATTAA ACTATAAGCC AGCGTTTTCA TTTAAAGAAG GAACTGGAAG ACTCCTTCGC
ACAATAGGAG TACTTATGCC AGACATAAGG GGTTACCATT ACAGTGATAT AGTAATGGCA
ATTGAGGAAT ATGCGTATAC TAAACAATTC GATATTATGC TCGCACTTCC AAAATGGGAA
GTTGATATCG AAGAACACAT ACTTGATCAG TACTTTCGCA GGAAGGTGGA TGGAATTATA
TTAGGAGAGT TGTTTGGTGG TCAAAAATTA ATCGAGAAAT TTACAAAAAG CGGTGTTCCA
GTTGTTTTAA TAGATTTCCG AGTTGATGAA ATCGACTTTG ATGTTGTAAA TGTTGATAAT
GTAACTGGTG GTTACTCAGC AATTAAATAC CTCTACGTCA ACGGTCACAG AAACATTTTA
TTTATTCCCG GTCCAGAAGT ATCTCCAGCA GCATTAGATA GAGAAAAAGG AATAAGGAAA
TTCGTTGAAA AGTTGCCTAA CAGAAGCGAA GTTAATATAT ACTATGGAGA ACACAGAGGA
TATAATTCAG AGCACGGTTG GGTTAGCGTG ACACAACATC TTAAGAAGTA TGGTTTAAAC
TTCACCGCAA TCTTTGCGGT AAACGATTGG GCTGCTTTAG GTGCCATAGA TGCATTGAAA
GACCATGGAA TTAAAGTACC AGACGAAGTA TCAATAATAG GGTTCGATGA CGCTCCATTT
GCACAGTATA CTAACCCAAG GCTAACAACC GTTATGCAGC CAAGATGGGA AATGGGAGTT
ACTGCTGCCC AATTGCTCAT CTCAAGAATA CTTGATAAAA AAGCAAGATT GCCACGAAAC
ATAATATTGC CAACAAAATT GATAGAACGT GAATCAGTGA AAAAAATACG GTAA
|
|---|
| Protein sequence | MANIREVAKL ANVSIATVSR VLNGSDRVSE ETRKRVLNAV KKLNYKPAFS FKEGTGRLLR
TIGVLMPDIR GYHYSDIVMA IEEYAYTKQF DIMLALPKWE VDIEEHILDQ YFRRKVDGII
LGELFGGQKL IEKFTKSGVP VVLIDFRVDE IDFDVVNVDN VTGGYSAIKY LYVNGHRNIL
FIPGPEVSPA ALDREKGIRK FVEKLPNRSE VNIYYGEHRG YNSEHGWVSV TQHLKKYGLN
FTAIFAVNDW AALGAIDALK DHGIKVPDEV SIIGFDDAPF AQYTNPRLTT VMQPRWEMGV
TAAQLLISRI LDKKARLPRN IILPTKLIER ESVKKIR
|
|---|
| |