Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0283 |
Symbol | |
ID | 5452705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 301230 |
End bp | 302624 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640874029 |
Product | glutamate synthase (NADPH), homotetrameric |
Protein accession | YP_001409806 |
Protein GI | 154248981 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTAA GAGATAGAAT AGAGGTCTTA GAACAACCAG CTGAGCAAAG GAAAAATAAC TTTAATGAAG TAGCTTTAGG TTACAACTAT GATATGGCAA AGGAAGAAGC AAAAAGATGT TTACAATGCA AAGTGCCTAC GTGCATTTCG GGATGTCCTG TCGGAATAGA TATTCCTGGA TTCATAAGAG AAATCGTCAA AGAGAATTTA GAAGGCTCGT TTAAGATACT TAAATCATAC AATTACCTTC CAGCTATCTG TGGAAGAGTA TGCCCTCAGG AAGTTCAATG TGAAGGTGCA TGTGTACTTA GTAAAGTAGG AAAACCTATA AATATAGGTG CTTTGGAACG TTTTGTCGCT GATTGGGCTT CTGAAAATAA CGTACAATTT GAAAATACTG AATACAGTAA GGAAATTATT ATAAAAAATA ATAAAAAGAG AGTTGCGATA ATTGGTTCAG GACCAGCTGG ACTTACGGTT GCTTCGGAAC TTGGGAAAAG AGGCTACCAA ATTGATATAT ACGAAGCACT ACATGAATTT GGTGGAGTGC TCATTTATGG AATCCCGGAG TTCAGGTTAC CAAAATCGAT CGTAAAGAAA GAGATATTTG ACCTCGAAAA ATTAGGTGTG AATTTTTTGA AAAATATACC GGTTGGTTAC GCAATACCCG TTCACGAAAT TCTTGAAGAT TACGATGCGG TTTTTGTTGG TGTTGGTGCT GGTACACCAA AGTTTATGGG TATACCTGGT AGCGAATTAA ATGGTGTTTA CTCTGCGAAT GAGTTTTTAA CCCGTGTCAA TCTAATGCGT GCCTATAAAT TTCCAGAATA TGACACACCT ATAAGAGTTG GGAAAAAGGC CGTAGTTGTT GGTGGTGGAA ACACAGCGAT GGACGCGGCA AGAAGTGCGT TGAGATTAGG TGCAGATGTA ACCATAGTTT ATAGAAGAAC AGAAGCTGAG ATGCCTGCAA GAAAAGCAGA AATTCACCAT GCCAAGGAAG AGGGGATAAA AATCTTAACG TTAGCTACCC CTGTAAAGTA CGTCGGCGAC GAAAATGGTA ACCTCATAGC TATAGAGTGC GTAAGGATGG AACTTGGCGA ACCAGACGAG AGTGGAAGAA GAAGACCCGT ATTTGTAAAC GGTAGTAATT TTATTATTGA AGCTGATACA GTAATTGAGG CAATTGGAAC AGAAGCAAAC AAATTCTTAC TTTCTCAATT TCCCGATCTG AAAACTAATA AATACGGTTA CATAATAACG AACGAATATG GACAAACAAG TATTCCAAAA GTATTTGCTG GTGGAGATAT CGTAACTGGA TCAGCAACAG TCATACTTGC AATGGGAGCA GGTAAAAGTG CTGCACAAGG AATTCAAAAA TTTCTTGAAG ATTGA
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Protein sequence | MAVRDRIEVL EQPAEQRKNN FNEVALGYNY DMAKEEAKRC LQCKVPTCIS GCPVGIDIPG FIREIVKENL EGSFKILKSY NYLPAICGRV CPQEVQCEGA CVLSKVGKPI NIGALERFVA DWASENNVQF ENTEYSKEII IKNNKKRVAI IGSGPAGLTV ASELGKRGYQ IDIYEALHEF GGVLIYGIPE FRLPKSIVKK EIFDLEKLGV NFLKNIPVGY AIPVHEILED YDAVFVGVGA GTPKFMGIPG SELNGVYSAN EFLTRVNLMR AYKFPEYDTP IRVGKKAVVV GGGNTAMDAA RSALRLGADV TIVYRRTEAE MPARKAEIHH AKEEGIKILT LATPVKYVGD ENGNLIAIEC VRMELGEPDE SGRRRPVFVN GSNFIIEADT VIEAIGTEAN KFLLSQFPDL KTNKYGYIIT NEYGQTSIPK VFAGGDIVTG SATVILAMGA GKSAAQGIQK FLED
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