Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0280 |
Symbol | upp |
ID | 5451636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 298346 |
End bp | 298969 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640874026 |
Product | uracil phosphoribosyltransferase |
Protein accession | YP_001409803 |
Protein GI | 154248978 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0035] Uracil phosphoribosyltransferase |
TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.706129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTATATG TAGTTGATCA CCCATTGATA AAGCATAAAC TCACGATTAT GAGAAAGAAA GAGACGGGTC CAAAAGAATT TAGGGAACTA TTAAGAGAAA TTACCCTTTT GATAACATAC GAAGCTACAC GTCACATACC AGTTTATGAA TTGGAAGTTG AAACCCCGTT AGAAAAAACC AAGGGTTATT ACATAAATGA TAAAGATATT GTTGTTATAC CCATATTACG TGCTGGACTT GGTATGGTTG ATGGAATACT TGAATTGCTA CCTAATGCGT CAGTTGGACA TATAGGCATC TACCGCGATC CAGAAACGTT GAAAGCTGTT GATTATTATT TCAAAACTCC AAAGCTCCAC GATAAAAGTG AAATCTTTAT TCTTGATCCA ATGTTGGCAA CTGGAGTGTC TGCAATAGAC GCAATAACAA AGGTTAAAGA ACTCGGTGGA AAGCAAATCA CATTCATATC TTTGATTTCC TCACCAGAAG GTGTAAAGGC TATCGAGAAG GCTCATCCGG ATGTGAATAT ATATACCGCA TCACTTGACA GAGAACTTAA CGACCATGGT TACATATTAC CTGGCCTTGG AGATGCCGGA GATAGATTAT TCCGAACAAA GTAA
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Protein sequence | MLYVVDHPLI KHKLTIMRKK ETGPKEFREL LREITLLITY EATRHIPVYE LEVETPLEKT KGYYINDKDI VVIPILRAGL GMVDGILELL PNASVGHIGI YRDPETLKAV DYYFKTPKLH DKSEIFILDP MLATGVSAID AITKVKELGG KQITFISLIS SPEGVKAIEK AHPDVNIYTA SLDRELNDHG YILPGLGDAG DRLFRTK
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