Gene Fnod_0277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0277 
Symbol 
ID5452116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp294660 
End bp296213 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content32% 
IMG OID640874023 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001409800 
Protein GI154248975 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.433516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCAT TATACAGAAA ATACAGACCC AAAAATTTTT ACGATATTGT TGGTCAGGAA 
CACATAAAAA AGCTTTTAAC GAATGCTTTA AAACTTCAAA AGATAAATCA TGCATATATC
TTTGCTGGTC CAAGGGGGAC AGGAAAAACC ACTACCGCGA GGATATTAGC GAAATCTTTG
AACTGTGAAA AAAATCAATT TGGTGAGCCA TGTAACGAAT GCACATCATG CCAAGCTATA
GATAATGGTT CTCATCTTGA TGTTATAGAG TTAGATGCTG CATCGAATAG AGGTATTGAT
GAAATAAGAA AGATAAAAGA AGGTGTAAAT TTTACTCCCG TAATGGGAAA ATACAAAGTA
TACATTATAG ATGAAGTTCA CATGCTCACA AGAGAAGCTT TCAATGCTCT TCTTAAAACA
TTAGAGGAAC CACCACAACA CATTGTTTTT ATACTTGCAA CAACCAATCC TGAAAAAATT
CCTCCAACAA TAATGTCAAG ATGCCATGTA CTTGAATTCA GAAACATATC TGAAGAAAAC
ATAATAAGTA AATTAAAATC AGTTTGCGAA AAAGAAGGTT TTGACGTAAC ATATGAAGCT
TTGAAGAAAA TAGCAAAACG TGCTGAGGGT GGACTAAGGG ATGCACTTTC AACGTTAGAG
CAAGTCATTA GATATACAGG AGGAGAAGTT ACCGAAAAAA TAGTTGATGA AGCATTAGGA
CTTATAAGTG AAGAAACCAT AGAAAAATTT ATAGAAGCAA CATTAAATAA CGATAGAGAG
TTGATCGAGA AAATATTGAA TGATATTTAC ATAGAACGTG GTGACTTTGA TACATTCATA
AACCAATTGA TTGAAAAAAC TTTAGAGAAA AAAGAAGATA ATATGTTAAA ATTAGCAAGT
GATTTTTATA ATGTTTTGAA AGAAATCAGA TTTGCAGAAG AGAAACTTTT AATTGCAAGG
TTAATGTTCC TATCAATTGC TAATAGATAT CACGGTAAAT ATTCGAATAT TTCTAATGTT
GCCTCAACTG CTCGATCTTC TCAGGACAAT GTTGGTACTA AGCAACTTTC CAAGAATATT
CAGGATGAAA AAATTACGGA ACAAAATGAA AATACACTTC CACAAAGCGA AAAGATGCCA
TCAGCACAAT TAAACGAAAG TGTGAAAAAT GAAGACATTC AGGTTGACTT GAAGAGAGAA
GAGAAAGAAG AGAAGCATTT ATCTCAAAAT GTTTCACAAG CTAAGTTCTT AAAACAAGTA
ACAAAAGAAT TGTTAGAAGA ACTCAAATTA AACGGCGATT TATCGATATT TGTTGGTTTA
TCATTGGCAA CTGTATATGA AAATGAAGAT AGTATAAAAA TTATCTTTGA CAAATCAAAA
CAGTTCAGTT ATGAAGTAAT AAAGGAGAAG AGGCAAGAAA TAGAATTACT CTACAAAAAT
AAAAGTGGGT TAAACAGACC TGTTGAAGTT ATCCTATCTG ATGAGATTAC AGATCCAGTT
CTTGAAAAAC TCAAAATGCT TTTTGATGAC AACAAATCTT CCTTAGGAGG GTAA
 
Protein sequence
MEALYRKYRP KNFYDIVGQE HIKKLLTNAL KLQKINHAYI FAGPRGTGKT TTARILAKSL 
NCEKNQFGEP CNECTSCQAI DNGSHLDVIE LDAASNRGID EIRKIKEGVN FTPVMGKYKV
YIIDEVHMLT REAFNALLKT LEEPPQHIVF ILATTNPEKI PPTIMSRCHV LEFRNISEEN
IISKLKSVCE KEGFDVTYEA LKKIAKRAEG GLRDALSTLE QVIRYTGGEV TEKIVDEALG
LISEETIEKF IEATLNNDRE LIEKILNDIY IERGDFDTFI NQLIEKTLEK KEDNMLKLAS
DFYNVLKEIR FAEEKLLIAR LMFLSIANRY HGKYSNISNV ASTARSSQDN VGTKQLSKNI
QDEKITEQNE NTLPQSEKMP SAQLNESVKN EDIQVDLKRE EKEEKHLSQN VSQAKFLKQV
TKELLEELKL NGDLSIFVGL SLATVYENED SIKIIFDKSK QFSYEVIKEK RQEIELLYKN
KSGLNRPVEV ILSDEITDPV LEKLKMLFDD NKSSLGG