Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0277 |
Symbol | |
ID | 5452116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 294660 |
End bp | 296213 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640874023 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_001409800 |
Protein GI | 154248975 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.433516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCAT TATACAGAAA ATACAGACCC AAAAATTTTT ACGATATTGT TGGTCAGGAA CACATAAAAA AGCTTTTAAC GAATGCTTTA AAACTTCAAA AGATAAATCA TGCATATATC TTTGCTGGTC CAAGGGGGAC AGGAAAAACC ACTACCGCGA GGATATTAGC GAAATCTTTG AACTGTGAAA AAAATCAATT TGGTGAGCCA TGTAACGAAT GCACATCATG CCAAGCTATA GATAATGGTT CTCATCTTGA TGTTATAGAG TTAGATGCTG CATCGAATAG AGGTATTGAT GAAATAAGAA AGATAAAAGA AGGTGTAAAT TTTACTCCCG TAATGGGAAA ATACAAAGTA TACATTATAG ATGAAGTTCA CATGCTCACA AGAGAAGCTT TCAATGCTCT TCTTAAAACA TTAGAGGAAC CACCACAACA CATTGTTTTT ATACTTGCAA CAACCAATCC TGAAAAAATT CCTCCAACAA TAATGTCAAG ATGCCATGTA CTTGAATTCA GAAACATATC TGAAGAAAAC ATAATAAGTA AATTAAAATC AGTTTGCGAA AAAGAAGGTT TTGACGTAAC ATATGAAGCT TTGAAGAAAA TAGCAAAACG TGCTGAGGGT GGACTAAGGG ATGCACTTTC AACGTTAGAG CAAGTCATTA GATATACAGG AGGAGAAGTT ACCGAAAAAA TAGTTGATGA AGCATTAGGA CTTATAAGTG AAGAAACCAT AGAAAAATTT ATAGAAGCAA CATTAAATAA CGATAGAGAG TTGATCGAGA AAATATTGAA TGATATTTAC ATAGAACGTG GTGACTTTGA TACATTCATA AACCAATTGA TTGAAAAAAC TTTAGAGAAA AAAGAAGATA ATATGTTAAA ATTAGCAAGT GATTTTTATA ATGTTTTGAA AGAAATCAGA TTTGCAGAAG AGAAACTTTT AATTGCAAGG TTAATGTTCC TATCAATTGC TAATAGATAT CACGGTAAAT ATTCGAATAT TTCTAATGTT GCCTCAACTG CTCGATCTTC TCAGGACAAT GTTGGTACTA AGCAACTTTC CAAGAATATT CAGGATGAAA AAATTACGGA ACAAAATGAA AATACACTTC CACAAAGCGA AAAGATGCCA TCAGCACAAT TAAACGAAAG TGTGAAAAAT GAAGACATTC AGGTTGACTT GAAGAGAGAA GAGAAAGAAG AGAAGCATTT ATCTCAAAAT GTTTCACAAG CTAAGTTCTT AAAACAAGTA ACAAAAGAAT TGTTAGAAGA ACTCAAATTA AACGGCGATT TATCGATATT TGTTGGTTTA TCATTGGCAA CTGTATATGA AAATGAAGAT AGTATAAAAA TTATCTTTGA CAAATCAAAA CAGTTCAGTT ATGAAGTAAT AAAGGAGAAG AGGCAAGAAA TAGAATTACT CTACAAAAAT AAAAGTGGGT TAAACAGACC TGTTGAAGTT ATCCTATCTG ATGAGATTAC AGATCCAGTT CTTGAAAAAC TCAAAATGCT TTTTGATGAC AACAAATCTT CCTTAGGAGG GTAA
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Protein sequence | MEALYRKYRP KNFYDIVGQE HIKKLLTNAL KLQKINHAYI FAGPRGTGKT TTARILAKSL NCEKNQFGEP CNECTSCQAI DNGSHLDVIE LDAASNRGID EIRKIKEGVN FTPVMGKYKV YIIDEVHMLT REAFNALLKT LEEPPQHIVF ILATTNPEKI PPTIMSRCHV LEFRNISEEN IISKLKSVCE KEGFDVTYEA LKKIAKRAEG GLRDALSTLE QVIRYTGGEV TEKIVDEALG LISEETIEKF IEATLNNDRE LIEKILNDIY IERGDFDTFI NQLIEKTLEK KEDNMLKLAS DFYNVLKEIR FAEEKLLIAR LMFLSIANRY HGKYSNISNV ASTARSSQDN VGTKQLSKNI QDEKITEQNE NTLPQSEKMP SAQLNESVKN EDIQVDLKRE EKEEKHLSQN VSQAKFLKQV TKELLEELKL NGDLSIFVGL SLATVYENED SIKIIFDKSK QFSYEVIKEK RQEIELLYKN KSGLNRPVEV ILSDEITDPV LEKLKMLFDD NKSSLGG
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