| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0267 |
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| Symbol | |
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| ID | 5452874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 281886 |
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| End bp | 285848 |
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| Gene Length | 3963 bp |
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| Protein Length | 1320 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640874013 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001409790 |
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| Protein GI | 154248965 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAATT TTGAAGTTTT GGAATTTTTA GTTGAAACAT ATTGGAGTAA AGATTATATA
GTTGAACAAG ATGGAAAAAG AAAGCTTGCC AAGTTTGTAA AAGAAGGACT TATTACTAGA
CCCGAAGAAG CAGTTTTAAA ATCAGAGTTA GCTAAAAACA TTCAGGGAAT AATCGTCCCT
GAAAGTTTTG TTTTTGAGAA ATCAACTATA TTAATTTACG ATATTGATAA TATCAAATAC
TATAGCAAAT TCGACGAAGA GATGAAAAAG CTTGTATCTT TGTTTTTATT AAACGTTGTT
AGAAACATTC TCCATATTCC AAAATTGTAC GTCCCTGTTC TCGGTTTTAT GGATATAGTC
AAAGTGGGAA CTGATATATT GCTGTTTTTA CCTTTTGTAC AAGATTATAA AAAATTAATT
GACTTAAATG TTCAGGAGAA AGAAATTCAG TATTTTATCG CTCCTGAGGT TATTCAAAAT
TCTTTGGTAA TAGATAGCTC AACAATTTAC GTTTTTGGAA AGGTAATAGA AACTGTAACA
GAAGATGAAA CAATTAAAGA ACTATCTTTT GAGATGACCA AAGAAGAGCC ATCACTAAGA
AAGATAAAAG AGGATATACC ATACTTTACT ATTTCAAGAA AGAAAAGAAC ACTTGCGTTA
AAGAGGATAG TTCGAGATGA GGAAAGTGAA ATATTAAAGT TTATTGAAGA TGAAAGTGCT
GATGGGAATT TTTTGGGAGT TGTAGGTAGC CAAAGAATAG GTAAAACTAC TATTATTGAA
AATATTGAGA ATACATTAAG AGAGAAAGGT ATTCCTTTCT TACATGCGAT GAGCGGCTCA
GATATAATTG CTCAAACATT ACAACTCGTG TCAGATATCA TACCAAGTGA ACTACTTAAC
GAATTGTCGA AATGTATTGA AAAAACGTGT AAAATAGATA CTATTTCTAT AGCAGTTGTA
CAAGCCCTTG AGAATTTAAA TAAGGTTGTT ATATTTGTCG ATGATTACCA TGAAGTTCAC
GAAACTCTGA AATCTTTTCT CAAGAAAATT TCAGATTTGA GTAAGAGTAA AAAGATAAAG
ATAATAGCAT TCAGTGTCGA AGATTTTGAG GAATTTGAAA AAAGAATATA CATTAGTCCT
TTCACAGTCG AGCAGGTAAA GAATTTGCTT GAAGTTTCTT TTAACACAGT GCATGAAATT
AACATTCTTT CCAATTGGTT AACAATAGTA TCGAATGGTT TGCCTGGCGT AGTAGTAGAG
TATTTGAGAT ACCTTTATGA AAATGATGTT CTTTACTTTA AAGGCAATGA ATTGATGTAC
GATTTAGATA AATTAGCAGA GATAGAGATG AAAGATGTTT TTGAGAAAAA AATAGAAAGT
CTTAGCAATG AAGAAAGATA TATTGCTATT CTTGGGCAAA AGTTCACAAA AGATGAGATA
AAAATGCTTA GTGATAAAAT AGGTAAAGAA ATAGATATTT CTAAGTTTGT GTCTGAAGGG
ATTATTTACA AAGAGTATGA TAAATACCGT TTTACGTTAA GGCAATATTG GGAATTACTT
TATAACAGTA TACCTTTACA AAAAAGAATT GAATTCCATA AATTTTTCGC TGAAAAATCT
AATGATATAT TCAAAAAAGC TTGGCATCTT GAAATGGTTG GGAATAAGGT AAGTGCTGCT
ACCGTTTATC TGAAGTATAT CAGAGAACTT CTTAACTATT ACGCTTCTCC TTCTCTTGTT
AAGTCTGTTA TTCGTAAGGT AAAGGAAATT ATTGGAAATA GAATTTCTTA CGCGCTCATA
AAATTCGAAG TAGAACTTCT TACAAGAACA GAAGAGATGG AAGAGCTTAA AAGCTTAAAT
ATTCCGGAAA CAAGGCTTTA TTCATATCAT TTAGCAAAGA AATTTTTCTT TTCGTATGAT
GAAAAAATGA CGTATGAAAT TTTGAAGAGA TTTCCAAACG CATACGGCAA AATTGGTGAG
TTAAGAAAGA AATTGCTCTT TCTACGTGCA GAGTACGAAA TCACAAAGAA AAGAAGCGAT
TATTTTCAAA AAGCCACAGC TATAGTTTCT GAATTAAAAG AAAATAATCC TATTCACGCT
GATATTCTTG TTGATGTTTA TTTTTTCACT GCGCGCGTTT TATCTGGTAA TCCTCAAAAG
GCTTTGCAAT ATCTTAAGAA AGCCGAAACA ATAGCTTTGG ATTATAATTT TGCTCACAAG
TTGCCAAGTA TATACAATAA TATGGCTATT GAAAGTTCGA ACATGCACAT TTCGATGGCT
TATCTGAAAA GGTCCGTTGA CATTGCAAAC AATATAGGAC TTCCTGCAAA AGGCTATCTG
GCACAATTAA ACATTTTGTA TCATCAATTG TATGCTGGAA AAATTAACGA TTTTATAAAT
GGGATTTCAA GTATAAAACC AAGAATAGAG CTACTTGGAT TGACACATGA AATTGTTTAT
GCCAATTCAT TAGAAGCTTA TTATCATGCT TACAATTTTG AAATTGAGGA AGCTCTCGAG
CACATTACAG AAATTGAAAA ATTAACGAAT GAAACTTACG ATGCAGAGAA AATTTTTTTA
AATGTTTTAG TTAGAAATTT TGAATCAGTG AAGAAATTAA TTTCAGAAAT AGAGATTTCT
AAATTAGATG AAGAAAACCT AAATGTTTTA GAGATTATAA AAAAATTTGA AAGTAATGAG
TTTGGAATTA TGTGGGAAAA GTACATAAAT AGAGGAGGAA AGGTTTTTAG GGAAGAAATG
TGCGCTGTTT TCGGCGATAA ACTTGTTAAA TTAACCCCTG AACTTTTCAG AAAAGAACTT
GAGTATTTGG AAAATAGATT TACATTAGAT GGAAGTTTAC TCTCGCTTGC GTTGGTTTAT
GAAGGATATG GTCATTATTA TAAGGGAATT GGGAAAATTT ATAAGGCGAA TGTTTACTAT
TCGAAAGCTA TAACAATTTA CAAGGATATA GGATTGATTA AAGCTGCAGA TTCTTTGTCT
AAAATGTATG ATATATCAAC TTCTACAGAA TCATTAAAGG AAATTGAAGA TACAAGATCT
CTTTTACTCG ATGTCTTAAC GAGCTTAAAA GTTGTTGATC CAAAAACCGA TCCGCAAGTT
TTAATGGATT ACTTTGTTTC AAAAGTTTTA TCTGTTTTTC CAGTTAAAAA TGTTTATTTC
AAAATATACG ATAGCGTTTT AGATAAAACA TTTGAAAGTG GTATTGGGGA TTTCAAAAAA
TATGATATGG ATTATATAAG TGTTTCACCG TTAGAAATTT ATCTTTTGGA TAACTTTGAT
CCTAAATCAC ATTATGAAAT TTATGCGTCT AACCCAGATG TTTCTTTCAG TGAAGAGTTA
AAGCAAAAAC TTATTTCTAA AATAGAAATC ATAGAATACG GTTTTGTTGC TGTTTTCAAA
AGTTTTTTAA CCCGTATGAG AAGTTACGTT GATCCACTTA CAAAGCTGTT TACAAGGTAT
TATTTTGCTG AACTTTTATC TCAATATTTT GAAAACGCAG TTAATCAAAA AGATAGTCTT
GCTATAGTCA TGTGTGACAT AGATAATTTT AAGAAGATTA ATGATACTTA TGGACACCTT
ACAGGTGACA AGGTGCTTAA AACTATAGCA AAAATTTTGA GAGATAATGT TAGAACAACA
GATATTGTTG GAAGATTCGG AGGAGAAGAA TTCATAATGG CATTTCCATC AACAGATTCT
GAAGAGGTTG TTTTAATATT AGAAAGATTA AGAAGACTAA TAAAGGATGT TCAAGAATTC
CCATTTAAGT TAACTCTTAG TTTTGGAGTT GTAAGTTATC CACAAGACAC TGAAAATATT
ATAATAAAAG CCCCAGAAGA TCTTATAAGA CTTGCTGATA CTGCCTTATA CCATGCTAAG
AATACAGGAA AAGATAAGAT TGTTGTATAT TCGGAGGGAA TGACAGGTGG ATTACATGCT
TAA
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| Protein sequence | MLNFEVLEFL VETYWSKDYI VEQDGKRKLA KFVKEGLITR PEEAVLKSEL AKNIQGIIVP
ESFVFEKSTI LIYDIDNIKY YSKFDEEMKK LVSLFLLNVV RNILHIPKLY VPVLGFMDIV
KVGTDILLFL PFVQDYKKLI DLNVQEKEIQ YFIAPEVIQN SLVIDSSTIY VFGKVIETVT
EDETIKELSF EMTKEEPSLR KIKEDIPYFT ISRKKRTLAL KRIVRDEESE ILKFIEDESA
DGNFLGVVGS QRIGKTTIIE NIENTLREKG IPFLHAMSGS DIIAQTLQLV SDIIPSELLN
ELSKCIEKTC KIDTISIAVV QALENLNKVV IFVDDYHEVH ETLKSFLKKI SDLSKSKKIK
IIAFSVEDFE EFEKRIYISP FTVEQVKNLL EVSFNTVHEI NILSNWLTIV SNGLPGVVVE
YLRYLYENDV LYFKGNELMY DLDKLAEIEM KDVFEKKIES LSNEERYIAI LGQKFTKDEI
KMLSDKIGKE IDISKFVSEG IIYKEYDKYR FTLRQYWELL YNSIPLQKRI EFHKFFAEKS
NDIFKKAWHL EMVGNKVSAA TVYLKYIREL LNYYASPSLV KSVIRKVKEI IGNRISYALI
KFEVELLTRT EEMEELKSLN IPETRLYSYH LAKKFFFSYD EKMTYEILKR FPNAYGKIGE
LRKKLLFLRA EYEITKKRSD YFQKATAIVS ELKENNPIHA DILVDVYFFT ARVLSGNPQK
ALQYLKKAET IALDYNFAHK LPSIYNNMAI ESSNMHISMA YLKRSVDIAN NIGLPAKGYL
AQLNILYHQL YAGKINDFIN GISSIKPRIE LLGLTHEIVY ANSLEAYYHA YNFEIEEALE
HITEIEKLTN ETYDAEKIFL NVLVRNFESV KKLISEIEIS KLDEENLNVL EIIKKFESNE
FGIMWEKYIN RGGKVFREEM CAVFGDKLVK LTPELFRKEL EYLENRFTLD GSLLSLALVY
EGYGHYYKGI GKIYKANVYY SKAITIYKDI GLIKAADSLS KMYDISTSTE SLKEIEDTRS
LLLDVLTSLK VVDPKTDPQV LMDYFVSKVL SVFPVKNVYF KIYDSVLDKT FESGIGDFKK
YDMDYISVSP LEIYLLDNFD PKSHYEIYAS NPDVSFSEEL KQKLISKIEI IEYGFVAVFK
SFLTRMRSYV DPLTKLFTRY YFAELLSQYF ENAVNQKDSL AIVMCDIDNF KKINDTYGHL
TGDKVLKTIA KILRDNVRTT DIVGRFGGEE FIMAFPSTDS EEVVLILERL RRLIKDVQEF
PFKLTLSFGV VSYPQDTENI IIKAPEDLIR LADTALYHAK NTGKDKIVVY SEGMTGGLHA
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