| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0266 |
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| Symbol | |
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| ID | 5452812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 278305 |
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| End bp | 281892 |
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| Gene Length | 3588 bp |
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| Protein Length | 1195 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640874012 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001409789 |
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| Protein GI | 154248964 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTGC CAATAACAGC AGAAAAACAT GATGAATATT ACATTGTCAA ATTCGCTTAC
TCGGATGAGA AACCCGTGCT AAATTACGAG GACAAAATAG ATGATCAATC CTTGAGAGAT
TTGATTTATT CTTTGATGTT TTATATTTAC GGTGTTAAAA GTGGTGTATT TCCTTCTTTA
GGTTATTATT CGTTAGATGA TATCTTTGTA TATGCAGGCC AAATATTCTT TTTACCACCT
ACTGTCTACT CATGGGATTT TATATATAAG GTACTTGATA AATCAGGAAG GAGTTTATTT
GTAGCTCCAG AATTTTTAGA AAAAGGTACC ACAAACTTTC AATCCACACT TTACGTCTGT
GGTAAGATTA TAGAATATTT CGATCATAAA AAGAAATATA ATTTTATTAC TCAAGAATTG
GTGAAAGAAA TACCTGAAGA CAGAAAGTTT TACGATGGAT GGTTAAAAGA ATTTGGATTA
TTTGACAATG AAGAGATAGA AGAGTTCTCT AAAGAAATGT TTGAAAAAAT AAAGAATTCA
AAGGAAAAAT TCAATATAAT AAGATTGAAA TCAGCACGTT GGATAGAATT AAATGCTGTA
TTGCTCAGTA TAAATAAAAA AGTATCTAGT TTAGAAAATT CGGCAATGAT ATTTGTTAAG
AACGACTTTA CGAATGTTCC AAGGCAGTTA ATGGCTAAAT ACAAAGGATA CGTTCCCGCT
TCTGAATATA ACCTGTTTCT AAGAGCTCTT TATGATAATG TAAAGTTTAA TTCTATAATT
CCAGTTATAA TTTCAACGTT TAATTCATTT GACAACATTT TTGTATTCAT AGAGGATTTA
GATAATTCTG ATTATTTTGT TCGTAGTTTT ATTAGCTACT TAAGCGAAAG TAATTTGTCT
AGTAAAGTAT ACGTCTTTTC TAAAGAATCA AAGTTTGCCA ATTTCACGTT TGAAATCCCT
AAATCAATTA AATTTAAAGT CGAAGATAAG CCACATGCTT TTGACGAACT TTGTCCAAAG
AATTTGAAGT ATCTTGCATT ACTTGGTGAG AACTTTTCAA GAAATGATGT GAGAAATCTT
GAAAAATCTT TGAAAAATAG GCTTGAAAAA GAAATCGAAT ATGGTTTGAA AAAAGGTATT
ATAGAATTAG ATGATGTTAA TTATAGATTT TCTAACGAAT ATTGGAAGCA ACTGTATGAG
TCGATAGATT TAGGAGAAAA GGTTGCTATA CATTCTAAAC TTGCAAAGGT GTATTTGAAT
TTGGATAATC CATACAGGGA TATTTTAAAA AGCGGATTCC ATTACACGTC CGCTGGTAAA
GATATATCAG CTGCAGTAAT TTATTTGAGA TTCATAAAGA AAAATTTGGA TACATACGTA
TTTTCAACTG AGCGAATGAA AGATATCTTT TCTAGGATTT ATTATCTTCT AAAGAAATGT
AATCACCTTG ACTCTTATGC TTTTCATTCA CTCAAATTGA AGTTTCAATA TCAATCTTTT
GAAGATTTAC CTTTTGAAGT TCCCTTGCCA GAAAGCAAAA AATTTCTGCA TCTCAAATTA
TTGGAAAAAT ACATCAACAA TAAAGAAAGG GAAGTTATAG AAGATTTTAC AAAGTTTTTT
GAAAAACCAC AAGTAAAATC TGAATATGAT TTTGAAGATT TTAAATTGCT TTCAGCTTAC
TTAATTTACA ATTACTCGTA TTACAGAGTC TACGATAAGT TGGAGAATAC CGAAGAAGTA
AAAAATATTG TTAATAATAT TAAGGAAAAA AACGAAAAGT GGGCGACTTT GAAAGCAGAA
TATTTATTGC TGATAGCTAA TTCAATGTTA TATAAAAACG GAAAAGAAGC AAAGATTTAT
TTAGAACAAA TGACAAAAAT CGCGACTCAC TATAACAAAA AATATCTTTT GATACAAGCA
TACAATGCTT TTGGTATATT AAATGATGCA ACTGCTCTTT CTATTGATAA TTTTAGAAGG
GCAATTCAAA TTTCAGATGA GATAGGTTAT GTAAAGAGAA AATTTATTCC GATGGTAAAC
CTTTTAAGAG CATTACTTTA TTTTGGATAC ATTGAAGAAA TGCGAGATAA AATAGATGAG
TTTGGGAAAT ATAAGTTAAT TATAAATAAT CCATCAGATT TAGCTTTTTA TTATAGAATA
ATATCATTTT TACCTATGTA CGAACAAAAA TACAAGGAAG CAAAAGAGAT TCTCAACAAA
TCTTTAGAGA TAGAATCTAA TTTTGGATTG CAAAAATCCT CGCTTAGAGC AATCATTCTA
AATGAGCTTA TCTGCGGTAA TTACGATAAT GCAAGAAGAA TTATAGTTGA GAATAAAGAT
GATCCAGCTA TAAAAACAAG AGCCTTCGAG TATTTAGTGA AGATGGTTTT AGCTGAGAAT
GATGATGAAT TAAAAGAAAT ATGGATTGAA TATAAGAACT CATCTTACGA ACTTTTAAGG
GAGGAGATAC TGTATATCTT CGCTGAAAAA ATTGCAAAAG TTGATTTAGA CGGATTTTTA
AAAGAAATTA GTAAGTGGGA AAATGAGTAT ACAACCACCG GTGTTAAACT GTCGCTTTTT
TACGTATTAC TTGCGAAACA TAAGTATCTA AAAACAATCG GGAATCATGT TCGTTTAGCG
CAATTAAATT CTGAAATTTG TACACTTGCA AATGATATAA AAATTGATCA TCCTATCTTA
AATGAATGTA TAAGTGAAAA CACGGATAAG TTCCTTGAAT TATTGCATAT CTTTAAGAGA
ATAGACATGA AAATTACTAT AGAGCAATTT GTTAATCTTT TTGCAGCGGA AATTCATAGG
CTATTTAGCG CAGAAAAATT ATTTTTGAAT GTCAATGATG AACTAATTGG AATTAGTTAT
AATATATCGA ATATTCCGTA TATCACAGAA ATTCCAAAAG AAGAGGTATT TCAACTATCG
CCATTGGAAG TTTTAATCAA AGAAAACATA GACGATAAAT CAAGTTATTT GATTTACATA
TATAGTGAAA ATTACAAATC AAATGATTCT TACGAACTTG AGAAGAGGCT GACGTTATTA
CAAGAGTTAT TTAGCGGGCA ATTAAGAGGC GTAATTTTAA GAGAAAGGGC AAACATAGAC
AGTCTGACTG GTTTGTATAA CAGGTGGAAA TTTAACCAAT TTATCAACGA ACTTTTCGAT
ACAAAATCAA AAGAATTTTC AATTTTTATT GCCGATATCG ATAATTTCAA AAAAATCAAC
GATACTTATG GTCATATGGT TGGGGATAGC GTATTAAAAA ATATAGCTAA AATTTTGAAA
GAACATGTAC GCGATGAAGG ATTAGTAGCA CGTTATGGTG GAGAAGAGTT TGTTGGGATA
GTATATAAAT CAAAATATGA AGCAGCAAAA TTATGTGATA CTATAAGAGA AAATATAGAG
AAAGAATCTT TAAAAATATT TGGTTTCAGA GTAACAATCA GTATAGGTAT GGCAGACGTT
AATGAAAAAG AAAATGTTAC TGAATTGCTT GGTTTAGCTG ATCAGAGATT ATACAAAGCT
AAAGAAGCGG GAAAAAACAG AGTTGTTTGG GGTGAATATA GATGCTGA
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| Protein sequence | MFLPITAEKH DEYYIVKFAY SDEKPVLNYE DKIDDQSLRD LIYSLMFYIY GVKSGVFPSL
GYYSLDDIFV YAGQIFFLPP TVYSWDFIYK VLDKSGRSLF VAPEFLEKGT TNFQSTLYVC
GKIIEYFDHK KKYNFITQEL VKEIPEDRKF YDGWLKEFGL FDNEEIEEFS KEMFEKIKNS
KEKFNIIRLK SARWIELNAV LLSINKKVSS LENSAMIFVK NDFTNVPRQL MAKYKGYVPA
SEYNLFLRAL YDNVKFNSII PVIISTFNSF DNIFVFIEDL DNSDYFVRSF ISYLSESNLS
SKVYVFSKES KFANFTFEIP KSIKFKVEDK PHAFDELCPK NLKYLALLGE NFSRNDVRNL
EKSLKNRLEK EIEYGLKKGI IELDDVNYRF SNEYWKQLYE SIDLGEKVAI HSKLAKVYLN
LDNPYRDILK SGFHYTSAGK DISAAVIYLR FIKKNLDTYV FSTERMKDIF SRIYYLLKKC
NHLDSYAFHS LKLKFQYQSF EDLPFEVPLP ESKKFLHLKL LEKYINNKER EVIEDFTKFF
EKPQVKSEYD FEDFKLLSAY LIYNYSYYRV YDKLENTEEV KNIVNNIKEK NEKWATLKAE
YLLLIANSML YKNGKEAKIY LEQMTKIATH YNKKYLLIQA YNAFGILNDA TALSIDNFRR
AIQISDEIGY VKRKFIPMVN LLRALLYFGY IEEMRDKIDE FGKYKLIINN PSDLAFYYRI
ISFLPMYEQK YKEAKEILNK SLEIESNFGL QKSSLRAIIL NELICGNYDN ARRIIVENKD
DPAIKTRAFE YLVKMVLAEN DDELKEIWIE YKNSSYELLR EEILYIFAEK IAKVDLDGFL
KEISKWENEY TTTGVKLSLF YVLLAKHKYL KTIGNHVRLA QLNSEICTLA NDIKIDHPIL
NECISENTDK FLELLHIFKR IDMKITIEQF VNLFAAEIHR LFSAEKLFLN VNDELIGISY
NISNIPYITE IPKEEVFQLS PLEVLIKENI DDKSSYLIYI YSENYKSNDS YELEKRLTLL
QELFSGQLRG VILRERANID SLTGLYNRWK FNQFINELFD TKSKEFSIFI ADIDNFKKIN
DTYGHMVGDS VLKNIAKILK EHVRDEGLVA RYGGEEFVGI VYKSKYEAAK LCDTIRENIE
KESLKIFGFR VTISIGMADV NEKENVTELL GLADQRLYKA KEAGKNRVVW GEYRC
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