Gene Fnod_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0257 
Symbol 
ID5453180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp267698 
End bp268588 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content37% 
IMG OID640874003 
Productperiplasmic binding protein 
Protein accessionYP_001409780 
Protein GI154248955 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000185774 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTT TGAGAAAAGT CTGGTTATTG GTACTGTTAT TGTTTACGGT TCTTTCCTTA 
GCTATTGCGG TTGTTGATGA TGCAGGAAGA ATTGTAAACA TTCCTATGCC ACCTCGTAGA
GTAGTTTCCG CGGCACCAAG TGCAACAAGG TACCTTCAAG CTTTGGGATT GGAATATAGG
ATTGTTGGAG TTACAGCATG GGATAATTAC AAAAAAGCGG AAAATATAGG TAACATGGTT
CCGCTTAATA TTGAAAAAAT TTATTCTTTA AAGCCTGATC TTGTACTGAT GTTTGGTGGA
TTCCAATTCC CAGAGGTTGA GAAACTTGAA AAAGCAAATC TTACCGCTTA TGTTTTGAAC
GCCAACACTC TCACCGACAT AATAAAAGCA GTTGGACAAC TCGGAGCAGT TTTCAACGTA
AAAGAAAAAG CAGATAAAAT TACCAACGAA TTGAGGCAAA AAATGACTGA AGTTGGTCAA
AAAACTTCAA AAATACCTCT TGAAAAAAGA CCTACAGTAT TTTTCACTAT AACCGTACCT
GATGAAAAAG TAAAAGAACT TTGGACAGCT GGTACGGGGT CCTATATGAA TGAACTTATT
GTTATTGCTG GCGGTAAAAA TATCGCAGCT CCATATTCCG GAAATAACGG TTGGTTATCG
GTAAGCTGGG AATGGTTGGT ACAACAAGAT CCCGATGTAA TTATCATTGG TGCTTATGGT
GATGTAAAGT CTGTTGAACA GGCTGTCAAA AATCATTCAA TAATGAAAAA TCTTAAAGCT
GTGAAAAACA ACAAAATCTT TGTAGTTGAT GGTGACGAAG TAAGTCAAGC GGCTCCACAT
ATATTCAAAT ATCTCGATAT TTTCTATAAT TTCTTCTATG GAGGAAAGTA A
 
Protein sequence
MKTLRKVWLL VLLLFTVLSL AIAVVDDAGR IVNIPMPPRR VVSAAPSATR YLQALGLEYR 
IVGVTAWDNY KKAENIGNMV PLNIEKIYSL KPDLVLMFGG FQFPEVEKLE KANLTAYVLN
ANTLTDIIKA VGQLGAVFNV KEKADKITNE LRQKMTEVGQ KTSKIPLEKR PTVFFTITVP
DEKVKELWTA GTGSYMNELI VIAGGKNIAA PYSGNNGWLS VSWEWLVQQD PDVIIIGAYG
DVKSVEQAVK NHSIMKNLKA VKNNKIFVVD GDEVSQAAPH IFKYLDIFYN FFYGGK