Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0257 |
Symbol | |
ID | 5453180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 267698 |
End bp | 268588 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640874003 |
Product | periplasmic binding protein |
Protein accession | YP_001409780 |
Protein GI | 154248955 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000185774 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTT TGAGAAAAGT CTGGTTATTG GTACTGTTAT TGTTTACGGT TCTTTCCTTA GCTATTGCGG TTGTTGATGA TGCAGGAAGA ATTGTAAACA TTCCTATGCC ACCTCGTAGA GTAGTTTCCG CGGCACCAAG TGCAACAAGG TACCTTCAAG CTTTGGGATT GGAATATAGG ATTGTTGGAG TTACAGCATG GGATAATTAC AAAAAAGCGG AAAATATAGG TAACATGGTT CCGCTTAATA TTGAAAAAAT TTATTCTTTA AAGCCTGATC TTGTACTGAT GTTTGGTGGA TTCCAATTCC CAGAGGTTGA GAAACTTGAA AAAGCAAATC TTACCGCTTA TGTTTTGAAC GCCAACACTC TCACCGACAT AATAAAAGCA GTTGGACAAC TCGGAGCAGT TTTCAACGTA AAAGAAAAAG CAGATAAAAT TACCAACGAA TTGAGGCAAA AAATGACTGA AGTTGGTCAA AAAACTTCAA AAATACCTCT TGAAAAAAGA CCTACAGTAT TTTTCACTAT AACCGTACCT GATGAAAAAG TAAAAGAACT TTGGACAGCT GGTACGGGGT CCTATATGAA TGAACTTATT GTTATTGCTG GCGGTAAAAA TATCGCAGCT CCATATTCCG GAAATAACGG TTGGTTATCG GTAAGCTGGG AATGGTTGGT ACAACAAGAT CCCGATGTAA TTATCATTGG TGCTTATGGT GATGTAAAGT CTGTTGAACA GGCTGTCAAA AATCATTCAA TAATGAAAAA TCTTAAAGCT GTGAAAAACA ACAAAATCTT TGTAGTTGAT GGTGACGAAG TAAGTCAAGC GGCTCCACAT ATATTCAAAT ATCTCGATAT TTTCTATAAT TTCTTCTATG GAGGAAAGTA A
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Protein sequence | MKTLRKVWLL VLLLFTVLSL AIAVVDDAGR IVNIPMPPRR VVSAAPSATR YLQALGLEYR IVGVTAWDNY KKAENIGNMV PLNIEKIYSL KPDLVLMFGG FQFPEVEKLE KANLTAYVLN ANTLTDIIKA VGQLGAVFNV KEKADKITNE LRQKMTEVGQ KTSKIPLEKR PTVFFTITVP DEKVKELWTA GTGSYMNELI VIAGGKNIAA PYSGNNGWLS VSWEWLVQQD PDVIIIGAYG DVKSVEQAVK NHSIMKNLKA VKNNKIFVVD GDEVSQAAPH IFKYLDIFYN FFYGGK
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