Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0243 |
Symbol | |
ID | 5451915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 250794 |
End bp | 251516 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640873990 |
Product | ABC transporter related |
Protein accession | YP_001409767 |
Protein GI | 154248942 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.498468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAGAAA TAAGAGATGA ATTAGATGTG ATTTTGAGTG TTGAAAATTT GAGTAAATCG TTTGAAAAGT TAAAGGTATT AGAAAATATA TCTTTTAACC TTCAAAGAAA TATGTCAATA GCATTTCTTG GACCTTCTGG CTGTGGTAAA ACAACTATGA TAAGGATTAT TGCTAATTTG GAAAAGGATT ACGAAGGTAA GATTGAAAGA AAATATTCGA AGATAGGATA CGTCTTTCAA GAACCAAGGT TGATACCATG GAAGAGTGTA CTTGAAAATT TGAAATTTGT TTGTGAGGAT GAGGAAAAGA TAATGGATGT TCTTAAAGTG ATGAAAGTAG ACAAGTATGC AGGTTATCTT CCGGCCAAAT TAAGTGGTGG TATGAGGCAA AGGGTTAACC TTGCAAGAGC GTTGGTGACA GAACCAGATA TTCTTTTTTT AGATGAGCCG TTTGCGTCGT TAGATATCCA TACGAAGATA GATATAATAA ACGATTTAAA TAAAAGGCGT GAGGAGAAAA GATATTCAAT GATAATTGTT ACACATGATA TCAAAGAGGC AATGCTTTTA GCTGATAAGA TTATTCTTTT GAGTGATAAA CCTAGTACCA TAATTGGTGA GTTCATCACA GCTGGTGTAC CAAAAACAAT AAGTGACGAA ACTTTTCAAA AGATTGAATC AAAGATACTT TCCGAAGTCA TTAGGAGGTG GAGTGCGGTA TGA
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Protein sequence | MQEIRDELDV ILSVENLSKS FEKLKVLENI SFNLQRNMSI AFLGPSGCGK TTMIRIIANL EKDYEGKIER KYSKIGYVFQ EPRLIPWKSV LENLKFVCED EEKIMDVLKV MKVDKYAGYL PAKLSGGMRQ RVNLARALVT EPDILFLDEP FASLDIHTKI DIINDLNKRR EEKRYSMIIV THDIKEAMLL ADKIILLSDK PSTIIGEFIT AGVPKTISDE TFQKIESKIL SEVIRRWSAV
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