| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0221 |
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| Symbol | |
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| ID | 5452767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 225520 |
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| End bp | 226944 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640873968 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001409745 |
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| Protein GI | 154248920 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTATC CACTCCCAAG TTGGGTTTAC GAATCTGTGA TTTATCAAAT CTTTCCAGAT
AGATTTGCAA TAGGTAAAGG AAAAACAGTG CATGATAAAG CACATCTTTA CACAAAAAGA
GGTGGAAAAA TTGTTGAATG GAACACATTA CCAAAACATA AGCCAAATAT TGAACATTGT
TTTGAATTCT ACGGCGGAGA TTTGTGGGGA ATTGCTGAAA AGATAGACTA TTTGAAAGAT
CTTGGCGTAA ATTTGATTTA TACAACTCCA ATTTTCCTCT CACCTTCTAA CCATAAATAC
GATATTATAG ACTATATGAA AATCGATCCC CAATTCGGTG GTGAAGCGGC GTTCAAGTAT
TACCTAAAAA AAGCAAAAGA AAATGGATTT AGAGTTATGC TTGATGGTGT CTTTAATCAC
CTGAGTAAAG AAAATAAATG GTTTAAGAGT GCACTTAGAG GTAAAAAAGA GCATTTAGCT
AAATTTTCAT TTTATAAAAA TGGTTACAGG GCGTGGCAAA ACGTTGATGG TATGCCCGAA
TGGAATTGGG AAGAAACTCC GGTTAGAGAA TATTTATTAA ATGTTGTGGA GCATTACTTG
AAAATGGGAG TAGATGGTTG GAGGTTGGAT GTCGGATTCG ATGTTGGATA CGTTAATAAT
GCGCTTATAA CATCAAGAGC AAAATCTGTA TCAACTGAAA AGTATGTTGT AACGGAAACA
TGGAATTTTC CATCTAATTG GGAAGTGGTT GATGGGATAA TGAATTATCA TTTCAGGGAA
AGTGTAATTG GCTGGTTGAA TGATAGTCTT AAAAACATCG GTTACGCGCT TCAAAGCGCT
TACGATAAAA CACCGAATAT TTACGGTTGT TGGAACATGT TGGATAGTCA CGATACTCAA
AGGATTGCAA CCGTTTTGCC AGATAAAGAT TTAAGGAAAC TCGCGATAGC CCTACAATTC
ACTTATCCCG GTGTACCTTT TGTTTACTAC GGAAGTGAAA TTGGTATGGA AGGCGGTTGG
GATCCAGAAA ATAGAGCTGG TATGATATGG GATGAAAAAC GATGGGACAA CGATTTAAGA
GAGTTTTACA AAAAGCTAAT CAAGATAAGA AAAACAGAGA CTGCTCTTAA AATAGGAACA
TTTGAAGTTA TAAACGATGA ACCTTTAGCC TTTTTAAGAA AAGCACCGTA TGTACTCGAT
GATGTTATAG TTGTTGTTAA CAAATCAGAA AAGCAAGAAA TTGCTCTTTC TGTACCTGAT
GGAAGACTCC TTGCTGGTAC GTGTTTTGTT GACTTATTCA CCAACGAAGA GTTTTGGATT
GTTGGTGGAA TACTAAGAAT AAATGTTCCA GCCAAAGGTT TCAGAATACT CAAGGCAACA
AATAAAACCA AAGGTAATTA CAACCAATAT AAAAGAATTT ATTGA
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| Protein sequence | MIYPLPSWVY ESVIYQIFPD RFAIGKGKTV HDKAHLYTKR GGKIVEWNTL PKHKPNIEHC
FEFYGGDLWG IAEKIDYLKD LGVNLIYTTP IFLSPSNHKY DIIDYMKIDP QFGGEAAFKY
YLKKAKENGF RVMLDGVFNH LSKENKWFKS ALRGKKEHLA KFSFYKNGYR AWQNVDGMPE
WNWEETPVRE YLLNVVEHYL KMGVDGWRLD VGFDVGYVNN ALITSRAKSV STEKYVVTET
WNFPSNWEVV DGIMNYHFRE SVIGWLNDSL KNIGYALQSA YDKTPNIYGC WNMLDSHDTQ
RIATVLPDKD LRKLAIALQF TYPGVPFVYY GSEIGMEGGW DPENRAGMIW DEKRWDNDLR
EFYKKLIKIR KTETALKIGT FEVINDEPLA FLRKAPYVLD DVIVVVNKSE KQEIALSVPD
GRLLAGTCFV DLFTNEEFWI VGGILRINVP AKGFRILKAT NKTKGNYNQY KRIY
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