| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0219 |
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| Symbol | |
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| ID | 5453311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 222579 |
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| End bp | 223637 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640873966 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001409743 |
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| Protein GI | 154248918 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAC TTTTAAGTTA CTTAGAAAAA GAGAATGTCA TTAATTTCCT TATGGATTTA
GATATACCTG CTTACATTGT TTCTAAAGAT AGGGTAATTG TATTTTGGAA CAAAGCAGCT
CAGAAATTAA CAGGTTATTC ACCAGAAGAT GTTATTGGTA AACCATGTGC TAAACAAGTA
CTAAATCACG TTGATAGGAC AGGAATACCG GTTTGTTCAA CGGAACTATG TCCGCTTTAC
CAAGCGATAA AGAACGGTAT TCCAGTTCAA GTACCGTTTG CTGTGTACGG TTTAACGAAA
AGTGGTAAGC GAAGGCCGCT GTCTATTTTT GGCATTCCAA TTAAACCAAA TGGTGAAGTG
ATAGGAGCTA TAGAACTATT TTCCGATGCA GAAAATATGC ATAGCGATAT GTCTCTTGCG
ATAAAAATTC AGCAGGCATT TGTACCACAG GACACGGATA ACGTTAAGTT TTTTTACAGA
CCATCCGTTG GGCTTGGTGG AGATATGATT TACTATAACC CTCCATGGGT TGGTATAATA
GATATCAGTG GTCACGGTGT TGCGGCTGCT CTTGTTAGTA TGTTGCTACG AACAATTTTT
GACATCGTAC TTTCCTTTGA TCCACCATTG CATGGGGTAC CATTTTTGAT TGAGAATGAA
TTGAAAAAAT ATCAACTTGA AGATATATAC TTTACAGCGA TATTGGGGAA ACTTGAAAAT
GATGTATTTA AGTTCCTTGA TATTGCTCAC CCTTCACCGG TGAATATCTC AAAAAAAGAA
ATATTGAATA CAATTAACAT TCCACCTATT GGGTTTGGTT TTTCTGAAGA TTATACTGAA
GAGGTTGTAA ACGTTTTCAA CTTATCTGAT GGAAAGTTGC TACTGTACAC CGATGGGATA
ACCGAAGAAA AAACAAAAAA TGGCATGCTC ACAACTGAGG GGTTAGTTAA TTTAGTAAGT
CCTGACGATA ATTTAGAGAT GATATACCTT AAAGTACTAA AAGAAAGAAT GTCCTCCTTA
CAGGAGGACG ATGTGACGAT GATTCTCTTA CAAAAATAA
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| Protein sequence | MYKLLSYLEK ENVINFLMDL DIPAYIVSKD RVIVFWNKAA QKLTGYSPED VIGKPCAKQV
LNHVDRTGIP VCSTELCPLY QAIKNGIPVQ VPFAVYGLTK SGKRRPLSIF GIPIKPNGEV
IGAIELFSDA ENMHSDMSLA IKIQQAFVPQ DTDNVKFFYR PSVGLGGDMI YYNPPWVGII
DISGHGVAAA LVSMLLRTIF DIVLSFDPPL HGVPFLIENE LKKYQLEDIY FTAILGKLEN
DVFKFLDIAH PSPVNISKKE ILNTINIPPI GFGFSEDYTE EVVNVFNLSD GKLLLYTDGI
TEEKTKNGML TTEGLVNLVS PDDNLEMIYL KVLKERMSSL QEDDVTMILL QK
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