| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0207 |
|---|
| Symbol | |
|---|
| ID | 5452638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 211195 |
|---|
| End bp | 212463 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640873954 |
|---|
| Product | lysine 2,3-aminomutase YodO family protein |
|---|
| Protein accession | YP_001409731 |
|---|
| Protein GI | 154248906 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1509] Lysine 2,3-aminomutase |
|---|
| TIGRFAM ID | [TIGR00238] KamA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGGT ATTTTAAAGA CATTCCTCTT TGGAAAAACG TGACAGAGGA AGAATGGAAT
GACTGGCGAT GGCAAATTAG AAACAGGATA ATGGATGTTG ACACGTTAAA GCAAGTTATT
AACCTCACAC CAGAAGAGGA AGAAGGTGTG AGAAACGCGC TCAAGACATT AAGAATGGCT
ATAACACCTT ATTATGCAAG CCTTATGGAT CCAGACAACC CAAAATGTCC AATTAGAAGA
CAGGCAGTAC CCACTGCGAA GGAACTTTTC ACATCGCAAT GGGATATGAC GGATCCACTC
CACGAAGATG AAGATTCACC AGTGCCCGGT CTTACACACA GATATCCAGA CCGCGTACTC
ATGTTAGTTA CAGACATGTG TTCTATGTAC TGTAGACACT GTACAAGGAG AAGATTTGCG
GGTCAACACG ATAGGGCAAG AACCAAACAG GAAATTGATG CGATGATTGA ATACGTAAGA
GAAACTCCAC AAGTGAGAGA CGTTCTCATA TCAGGTGGAG ACGGTTTGCT CGTTGGAATT
GAGATGTTAG AATATATCCT CAAAGAATTG AGGAAAATAA AACATGTTGA AATCATCAGA
ATTGGTACAA GAACTCCAGT AGTGCTGCCA CAAATGATAA CACCTGAACT GACAAACATG
TTAAAGAAAT ATCATCCAAT TTGGATAAAT ACACACTTTA ACCATCCAAA AGAAATAACA
CCAGAATCAT CAAGGGCATG TGAAATGTTA GCAGATGCCG GAATACCCCT TGGGAATCAA
TCTGTTTTAC TGAGAGGTAT AAATGACAGT CCTTACATAA TGATGGAGCT CGTTCACCAA
CTCGTTAAAA TCCGTGTGAG ACCTTACTAC ATCTACCAGT GTGACCTTTC ACAAGGCTTA
ACTCATTTCA GAACATCTGT TAAAAAAGGA CTTGAGATAA TGGAAGCACT GATTGGTCAC
ACATCAGGCT TCTGCGTTCC ATGGTTTGTT GTTGACGCGC CAGCTGGCGG TGGAAAGATA
AGAGTTATGC CCAATTACGT CATATCAATG TCAGACCATA CAGTCATACT GAGAAACTAC
GAAGGTGTTA TCGTCGCATA CCATGAACCA GAAGACACGG AAAGCGACGT TGATGATAGC
GAATACAGAG AAAAATACAA ATTCTCAGGC GTTGCTTCAC TCTTCACCGA TAAGAAAATA
AGTATCGAGC CCGCACACCT TGAAAGACAT GAAAGAATAA AAGAATGGAA GGAAAAGAAA
GGCAAATAA
|
|---|
| Protein sequence | MARYFKDIPL WKNVTEEEWN DWRWQIRNRI MDVDTLKQVI NLTPEEEEGV RNALKTLRMA
ITPYYASLMD PDNPKCPIRR QAVPTAKELF TSQWDMTDPL HEDEDSPVPG LTHRYPDRVL
MLVTDMCSMY CRHCTRRRFA GQHDRARTKQ EIDAMIEYVR ETPQVRDVLI SGGDGLLVGI
EMLEYILKEL RKIKHVEIIR IGTRTPVVLP QMITPELTNM LKKYHPIWIN THFNHPKEIT
PESSRACEML ADAGIPLGNQ SVLLRGINDS PYIMMELVHQ LVKIRVRPYY IYQCDLSQGL
THFRTSVKKG LEIMEALIGH TSGFCVPWFV VDAPAGGGKI RVMPNYVISM SDHTVILRNY
EGVIVAYHEP EDTESDVDDS EYREKYKFSG VASLFTDKKI SIEPAHLERH ERIKEWKEKK
GK
|
|---|
| |