| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0182 |
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| Symbol | |
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| ID | 5452961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 186286 |
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| End bp | 188331 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640873929 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001409706 |
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| Protein GI | 154248881 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTCTG AAAAAATAAA ACAGGAGGTA GAAAAGCTAA GAAAAGAAAT TGAGTACCAT
AATTACAGAT ACTATGTTCT TGCTCAGCCA GTCATAAGTG ATGAAGAATA CGATAAATTG
ATGAAACGAT TAATGGAGTT AGAGGAAAAA TATCCTGAGT TAAAAACTCC CGATTCACCA
ACACAAAGAG TTGGTGGACA GCTGATTGAG GGATTTGAGA CAGTTGAACA CAGCGAACCA
ATGCTCAGCC TTGATAATAC ATACAACGAA AATGAAATAA GGAATTTTCA CGAAAGAATT
AGAAAAGTTG TTAGAGATGT TCAATACGTT GCAGAACTTA AAATTGACGG AGTATCTATT
GCTTTGAGAT ATGAGAATGG TCTTTTAGTA AGGGCTATCA CAAGAGGCGA TGGGTTAAGA
GGCGATGATG TTACTGCAAA TGTCAAAACA GTTAAATCAA TTCCGCTTAG ACTTCCCGAA
CCTCTAACGA TAGAAGTACG TGGTGAAATA TTCATGCCAG TTCAATATTT TGAAGAATTT
AATCGACAAC GTGAAGAAGA GGGTTTACTG CCATTTGCTA ATCCAAGGAA CGCAACGGCG
GGAACGCTTC ACCTACTTGA TCCATCACAA GTTGCTCAAA GAAAATTGGA TTCCTTCATG
TACTATATTG TAAAACCACA ACAATACGAT TTGAAAACTC AATGGGATGC GCTTAAGTTT
TTGGAAAAAT TACATTTCAA AGTTAATCCA CATAGTAAAT TATTAAGCTC GATAGAAGAA
GTGATAGATT ATTGGAAAGA ATGGACCGAA AAAAGGAAGA AACTTGAGTA TTGGATAGAT
GGTGTTGTAG TAAAGGTTAA CGATTTTGAA CAGCAAAACG AACTTGGTTG GACTGCTAAA
TCACCACGTT GGGCAATTGC CTTTAAATTT CCAGCGCAAC AAGTTAGAAC GAAGGTCTTA
AATATCACAT TCCAGGTAGG AAGAACAGGG ACTATTACAC CTGTTGCGGA GTTTGAACCG
GTTGAACTTG AAGGTAGCAT AGTTAAGAGG GCTTCTTTGC ACAATTTTGA CTATATAAAA
GAAAATGATA TACGTGTAGG AGATTATGTT TTTATAGAAA AAGCTGGAGG TATAATTCCA
CAGATTTCGT ATGTCTTAAA AGAATTACGT GACGGTGATG AAATAGAAAC TGTTCCACCA
GAAAAATGTC CCGAATGTGG AGGACCTGTT GGTAAAGAGT CGGGAGAATA CGTAGCTTAC
AAATGTCTGA ATCCACATTG CCCAGCAAAA TTGAAAAGAC ATATTGAAGT ATTTGTATCA
CGTCAAGCGA TGGATATACA AGGTCTTGGG CCAAAGATTA TTTCTAAGAT TGTTGATGCT
GGATTAGTTA AGGATATAGC AGATTTATAT TATTTAAATA TCTTTGATTT AGCGCAAATA
AGCGGACTTG GTCCAAAAAT GATATCAAAT ATACTAAGTG AGATAGAAAA ATCAAAACAA
AATCCAATTG AAAAATTGCT AGTTGGACTT GGAATACCAG GTGTTGGTGA AAAGATTGCA
AAAGTGCTTG CCAAAAAGTA TAAAAGCATG GAAGAACTTT CAAAAGCAGA TATAAAAGAA
TTGAGTGAAA TTGAAGGAAT TGGAGAAGAT ATCGCTAAGA ATATAGTCGA ATATTTCAAT
TCGCCAAAGA CAAAGGAAAT ATTGGAAAAA TTACGAAAAG CTGGAGTAAA TCTCGAAAGT
GCTGAAACTA CAACTTCAAA TATTCTAGAT GGACTTACAT TTTGTGTAAC TGGAACCTTG
GAGAATTTTT CAAGGGAAGA GATAAAACGC TTTATAGAAT CACTTGGTGG ACATTTTACG
GATAACCTTA CTAAGAAAAC AGATTATCTT CTAGTAGGCA CAAACCCGGG AAGCAAATTA
GAAAAAGCGA AAAAGTTTGG TGTTAAAGTT TTGAATGAAC AAGAATTTTT AGAAATGCTT
GAAAAGAAAG GAGTTGAACT CAAAGAATCG TGGAAAAAGC CGAAACCAAA AGATACGCTG
TTTTAG
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| Protein sequence | MVSEKIKQEV EKLRKEIEYH NYRYYVLAQP VISDEEYDKL MKRLMELEEK YPELKTPDSP
TQRVGGQLIE GFETVEHSEP MLSLDNTYNE NEIRNFHERI RKVVRDVQYV AELKIDGVSI
ALRYENGLLV RAITRGDGLR GDDVTANVKT VKSIPLRLPE PLTIEVRGEI FMPVQYFEEF
NRQREEEGLL PFANPRNATA GTLHLLDPSQ VAQRKLDSFM YYIVKPQQYD LKTQWDALKF
LEKLHFKVNP HSKLLSSIEE VIDYWKEWTE KRKKLEYWID GVVVKVNDFE QQNELGWTAK
SPRWAIAFKF PAQQVRTKVL NITFQVGRTG TITPVAEFEP VELEGSIVKR ASLHNFDYIK
ENDIRVGDYV FIEKAGGIIP QISYVLKELR DGDEIETVPP EKCPECGGPV GKESGEYVAY
KCLNPHCPAK LKRHIEVFVS RQAMDIQGLG PKIISKIVDA GLVKDIADLY YLNIFDLAQI
SGLGPKMISN ILSEIEKSKQ NPIEKLLVGL GIPGVGEKIA KVLAKKYKSM EELSKADIKE
LSEIEGIGED IAKNIVEYFN SPKTKEILEK LRKAGVNLES AETTTSNILD GLTFCVTGTL
ENFSREEIKR FIESLGGHFT DNLTKKTDYL LVGTNPGSKL EKAKKFGVKV LNEQEFLEML
EKKGVELKES WKKPKPKDTL F
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