Gene Fnod_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0167 
Symbol 
ID5452581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp171073 
End bp172254 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content36% 
IMG OID640873914 
Productmajor facilitator transporter 
Protein accessionYP_001409691 
Protein GI154248866 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000162796 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGATG CGAAAAATAT GAAGAAAAAA GCTTTATATT TTATTGTACT AATGGGTTTT 
GTAAGTCTTT TCAGTGATAT AACTTACGAA GGAGCAAGAA GTTTAGTAGG ACCTTATCTG
GGACTTTTGG GTGCGTCAGC GGTAGTTGTT AGCGCAATTG CCGGTTTGGG TGAGTTATTG
GGGTACACTC TCCGTTTTGT TACTGGAAAG CTCGTTGACA AAACTAAAAA ATATTGGTTT
TTTGCCATTC TTGGTTACTC AATTAATTTG TTAGTTATCC CAACTTTGGC TTTGACAAAA
CATTGGATAC TTGCCGCAAT ACTTGTTATT CTTGAAAGAG TTGGTAAAGC TTTAAGAAAA
CCCGCAAAAG ATACCATAAC GTCTTTTGCA AGTAGTCAAG TTGGTTATGG TACAGGTTTT
GCCATTGAGG AATTCATGGA TCAAATAGGA GCCACAATAG GCCCTCTTTT CATGAGTTTA
ACTATCGCAA ATAACATAAA ACTCGAAACT GTTGATGCTT ATAGGAAGGC TTTTGCGTTT
CTTGTTTTTC CTGCTGTTAT AACAATAGGT ATAATTTTTA TCGCAAGAGT GCTCGTACCA
AATCCGGAAA AAATGGAAAA AGCTAAAGAA ACGATTAAAG ATGTAAAACT CGACAGGACA
TTTTATTTGT ACTTAGCTGG TATATCTCTT ATCGCTTTTG GCTTTGCGGA TTTTGCATTG
ATTGGTTTTC ATGCTCAAAA GCTAAATCTT CTTTCACCTG CGATGATTCC AATAGCATAC
ATGATTGCCA TGATTGTCGA TGCGTTTGCA GCGCTTTTCT TTGGAAAATT ATTTGATAGA
TTAGGAATAG GTGTTTTAGC TATCTCAACA TTTATTTCTG CATTTTACGG GATTTTTTCT
TTTGGAAATA GTGGGACCTT TATTATGGTT GGTTCGATAC TGTGGGGTAT CGGTATGGGC
GCTCAGGAAT CTATTATGAA AGCAGCCGTT GCAAAACTTG TTGAAAAAGA AAAAAGGGCA
ACTGCATATG GATTCTTCAA CGCAGTCTTC GGAATAGCTT GGTTTGTAGG TAGTGCATTA
CTTGGAATTT TGTACAGTAT AAGTATAAAA AGTTTAATTG CCGTTTCCAT TATTTCTGAA
ATTGCAGCTG TAATTATTTT CTTAACGATT AGAAAAAGTT AA
 
Protein sequence
MQDAKNMKKK ALYFIVLMGF VSLFSDITYE GARSLVGPYL GLLGASAVVV SAIAGLGELL 
GYTLRFVTGK LVDKTKKYWF FAILGYSINL LVIPTLALTK HWILAAILVI LERVGKALRK
PAKDTITSFA SSQVGYGTGF AIEEFMDQIG ATIGPLFMSL TIANNIKLET VDAYRKAFAF
LVFPAVITIG IIFIARVLVP NPEKMEKAKE TIKDVKLDRT FYLYLAGISL IAFGFADFAL
IGFHAQKLNL LSPAMIPIAY MIAMIVDAFA ALFFGKLFDR LGIGVLAIST FISAFYGIFS
FGNSGTFIMV GSILWGIGMG AQESIMKAAV AKLVEKEKRA TAYGFFNAVF GIAWFVGSAL
LGILYSISIK SLIAVSIISE IAAVIIFLTI RKS