Gene Fnod_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0163 
Symbol 
ID5452553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp167346 
End bp168455 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content39% 
IMG OID640873910 
ProductABC transporter related 
Protein accessionYP_001409687 
Protein GI154248862 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGG TTGTACTTGA ACATGTATGG AAGATATATG AAGGCAAGGT TGAAGCAGTT 
AAAGATGCAA ATTTTACAGT CGAAGATAAG GAATTTGTCG TGTTGCTTGG TCCATCTGGT 
TGTGGAAAAA CAACTACACT AAGAATGATT GCAGGGCTTG AAGAAATTAC GAAAGGTGAA 
ATCAAAATCG ATGGAAGAGT TGTAAACGAT GTTGAGCCAA AAGATAGGGA CATCGCATTC 
GTTTTCCAAA ACTACGCACT TTATCCACAT ATGACTGTTT ACGAAAATAT GGCGTTTGGT 
CTTAAGCTTA GAAAAGTTCC AAAAGATGAG ATAGAAAAAA GAGTTAGAGA AGCTGCAAAA 
ATTCTTGAGA TTGAGCATTT ATTAGACAGA AAACCAAGGC AACTTTCCGG TGGTCAGAGG 
CAAAGAGTCG CCGTTGGAAG AGCTATCGTG AGACATCCGA AAGTTTTCCT ATTCGACGAA 
CCTCTTTCAA ACCTCGACGC AAAACTTCGT GTTCAAATGA GAGCTGAACT TAAGAAGTTA 
CACGCAAGAT TAGAAGCGAC AATCGTTTAC GTTACACACG ACCAAGTTGA AGCTATGACA 
ATGGCAGACA AGATTGTTAT CATGAAAGAC GGTTTAATCC AGCAAATTGG TAGCCCGTAC 
GAAGTTTACA ATAGACCAGC GAATATTTTC GTTGCAGGAT TCATCGGTAG CCCATCAATG 
AACTTTATTA ATGGAAAGAT AATCAAGGGT GAAGGTGGTC TTTGGGTAAA GACAAGCGGA 
TTAAAATTGA AGGTTCCCGC AGAATACGAA GAGAAACTTT CAAAATATGT TGATAAAGAT 
ATAATATTTG GTATAAGGCC AGAAAATATA TACGACAAAA TGTTCGCAAT CGCGCCAAAA 
CCAGAAAATA CCGCTGAAGT TACCGTTGAT GTTGTTGAAC CACTTGGTAG CGAAACATTA 
CTACACGTTG TTGCTGGTGA GGATAGGCTT GTAGCAAGAG TTAACGCAAA GAGCCAGGCA 
AAGGAAGGCC AGAAGATAGA CCTCGTTTTC GACATGACAA CAATGCATGT GTTCGATAAA 
GAAACAGAAA AAGAATTACT CCACTGGTAA
 
Protein sequence
MAQVVLEHVW KIYEGKVEAV KDANFTVEDK EFVVLLGPSG CGKTTTLRMI AGLEEITKGE 
IKIDGRVVND VEPKDRDIAF VFQNYALYPH MTVYENMAFG LKLRKVPKDE IEKRVREAAK 
ILEIEHLLDR KPRQLSGGQR QRVAVGRAIV RHPKVFLFDE PLSNLDAKLR VQMRAELKKL 
HARLEATIVY VTHDQVEAMT MADKIVIMKD GLIQQIGSPY EVYNRPANIF VAGFIGSPSM 
NFINGKIIKG EGGLWVKTSG LKLKVPAEYE EKLSKYVDKD IIFGIRPENI YDKMFAIAPK 
PENTAEVTVD VVEPLGSETL LHVVAGEDRL VARVNAKSQA KEGQKIDLVF DMTTMHVFDK 
ETEKELLHW