| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0162 |
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| Symbol | |
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| ID | 5452561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 166564 |
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| End bp | 167241 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640873909 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001409686 |
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| Protein GI | 154248861 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCCAAATA TATACTTTTG CATTCCTAAG AATGATTCTG TTTATTTTGA TGAGCATGAA
GTTACACATA TGAAAGTAAT GAGGCTAAAA GAAGGTGAAA TAGTCGAAGC AACAGACGGA
AACGGTGGAA AATATAAAGT TATAATAAAA TCTATTGGAA AAAACGAAGC GTACGGCAAT
GTCCTATCTT ATGAATTTGT TGAAGTTACA AACAATAAAC TTGTACTCTT CGCTCCTTCA
GGTAGATGGG AAAGGCTCAG ATGGACTATT GAAAAAGCCG TCGAATTGGG TGTAGATGAG
ATATACGTCT TCAACAATGA AAGGGCTTCA CGACATTACG ACGATAAGCA AGACAAGCTT
GAGCTTATTG TAAGGGAAGC ATCAAAACAA TGTGTTAGGT ACCACTTTCC AACAATAAAA
CCCATAGAAT TTTTAGATAT TTTCTCTCTA GCACCGGAGA GTACATATAT CTTAGATTTT
AAAGGAAGAA AAATTCCAAA GAGAATATCC AAGAGTGTTG GTATAATAGC TGGACCTGAA
GGAGGATTTT CAAAAAGCGA ATTAAAATTG CTTAAAAGCA AATTCAAAAG TATCTGTTTA
GGAAAAAAGA TATTGAGATT CGAAACAGCT ATAATACTCT CAACCGGTTT TTTTGCTATG
AAATTGGGAA AAATTTAG
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| Protein sequence | MPNIYFCIPK NDSVYFDEHE VTHMKVMRLK EGEIVEATDG NGGKYKVIIK SIGKNEAYGN
VLSYEFVEVT NNKLVLFAPS GRWERLRWTI EKAVELGVDE IYVFNNERAS RHYDDKQDKL
ELIVREASKQ CVRYHFPTIK PIEFLDIFSL APESTYILDF KGRKIPKRIS KSVGIIAGPE
GGFSKSELKL LKSKFKSICL GKKILRFETA IILSTGFFAM KLGKI
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