Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0156 |
Symbol | |
ID | 5452601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 157447 |
End bp | 158145 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640873903 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_001409680 |
Protein GI | 154248855 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000017852 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATGGC TTATTGAAAC TAACATTAAT GAAATGAAAA AAATTTTAAC AAAAGAGGCA TGGTACGTTG AAGATCTCCT TAGATTAACA ATGGAAGCTT TTAAAGAACG CAATCTGGAA TTAGCGAAAA AAGTTAAAAA TCAGTATTGG GATATATATG AAGAGTACCT AAATATACTA AATTTTTCTC AAACAATTGT TGGGACATCT AACCCAAGCG GTTACGAGCT GAGATTTATT TTTGGAAGTG TGCTTGTTGC AAAAGTTTTG TTGGATATAA GTTCTAGGCT TAAAGATATC GCTGAGGATA TAGAAAATTT GATAAAAGAG CCGGAGCTCA ATCAAAGTAT CATGCTTCCC GAAATGTTTT CATTCGCTCA AAAAATGCTA AGAAAAGCAT TGAGAATATA TGTTGACCAA AATACCGAAG GTGCCTATGG AATATGTAAC CAAGATGAGA TTATGGATAA AATGCTTGAA AAATTCCAAG AAGATATAAC AACGATCATA CAAAATAATC CAAGGTTGAT TAAGAGGGGT TTAATTTTGT TAGATATTTC AAAAATCTTA GAGGAAATTT CAGATTTTGC CGTTCAGATT ATAGAGATTA CATTTTACAT TTTGACTGGT AATTATTACA CATGCTACAA TGACGAATTA CAACAATTTT CAGTTGATAA CCTTAAAAGT GAAAATTGA
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Protein sequence | MKWLIETNIN EMKKILTKEA WYVEDLLRLT MEAFKERNLE LAKKVKNQYW DIYEEYLNIL NFSQTIVGTS NPSGYELRFI FGSVLVAKVL LDISSRLKDI AEDIENLIKE PELNQSIMLP EMFSFAQKML RKALRIYVDQ NTEGAYGICN QDEIMDKMLE KFQEDITTII QNNPRLIKRG LILLDISKIL EEISDFAVQI IEITFYILTG NYYTCYNDEL QQFSVDNLKS EN
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