Gene Fnod_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0148 
Symbol 
ID5452491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp149784 
End bp151670 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content36% 
IMG OID640873895 
ProductABC transporter related 
Protein accessionYP_001409672 
Protein GI154248847 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA GAGAACAAAC ACAAAAACAA AGACCACCAA GACCAATGGG ACCTGGAGCT 
GGAGGACCAG CATTTGCAAG AGGTGGCGAA AAACCAAAAG ATTTCAAAAA AGCCCTGAAA
AAGCTTATGA CTTACCTAAG ACCTCACCAA TATGCGATTA TAGCTGTATT TGTAATAACA
ATAATTGCAA CAGTTCTCAC AATAAAAGCA CCGAAAATTT TAGGAGAAGC AACAACAGAA
ATATTCCGAG TCATTATGTT AAGAAAAACA CCATTCTCCG GATTCCTTAA CACATCTATG
GACTTCGATA AGATATTTAG AATTCTTTTG AACGTTGCTC TACTTTACGG AATATCTGCG
TTGTTAAACT TTTCCCAAGG TTACATGATG GCAGGTATTA CACAAAAAAT AGTAAAGAAA
ATGAGGGAAG ATATAAATGA TAAATTGAAA AGACTCCCCC TAAGTTTTTA CGACCACAGG
TCACACGGTG ATATCATCAG TAGGATCACC AATGATATTG ATTTGATAAG TAACACGTTG
CAGCAGAGTT TAACACAATT TATCTCTGGT ATAGTAACAA TTGTGGGTAT AACATATATG
ATGCTAACTA TAAATGTCAA ACTCACACTT TTAACGTTAA TAACATTGCC ATTAAGTGCT
ATAGCAACGA TAGTTATAGC AAAATATTCA CAAAAGTACT TTGCAGCGCA ACAAAAATTA
CTGGGAAAAC TCACAGGACA AGTTGAAGAA GTTTATGGAG GACACATAGT TGTAAAAGCT
TATGGAAGAG AAAAAGATGA GCTTGAGAAA TTCACATATG TAAATACCGA ATTATACAAG
GAAAGTAAAA AAGCACAATT TTTAACAGGT ATAATAATGC CAATGATGAA TTTTATCGGT
AACCTTGGCT ATATAATCGT TGCAGTTGGC GGTGGTGTAT TGGTAACTAA GAAAGCCATT
ACAATTGGTG ATGTTCAGGC ATTTATACAG TACTCAAGAC AATTCAACCA ACCGATAATC
CAAATCTCAA ACATAGTAAA TATGATCCAA TCAACCTTGG CAGCTTCGGA AAGAGTCTTT
GAAATATTAG AAGAAAATGA AGAAGTTCCA GATAAAGAAA CAGCTGTAGA ACTGGATAAA
GTTGACGGAA ACGTGAAGTT TGAAAGTGTG AAATTTAGCT ATTATCCTGA AAAACCGCTG
ATCGAGAATT TAAACATCGA TATTAAGAGC GGTCAGATGG TCGCTATAGT TGGTCCGACA
GGCGCAGGAA AGACAACACT TGTAAACTTG CTCATGAGAT TTTACGAGAT TCAAGGTGGA
AGTATAAGAG TAGATGGAAT AGATATACGC GATATTAAAA GATACAACCT CAGAAAACAC
TTTGGAATGG TTTTGCAAGA CACTTGGTTA TTCTCTGGTA CAATAAAAGA CAATATCGCT
TATGGTAAAA CAAATGCGAC AGAAGAAGAA ATAATAAAAG CAGCAAAGAT GGCTCATGTG
CATCATTTCA TAATGGCATT ACCAGACGGG TACAACACAA CCATAGGCGA AGACTCAACA
AATATCTCGC AAGGTGAAAA ACAACTCATA ACAATTGCAA GAGCGTTTTT AGCCGATCCA
AGTATCCTAA TACTTGACGA AGCCACAAGC AACGTTGACA CACTTACGGA AGTATATATC
CAAAAAGCAA TGAACGATTT ACTAAAAGGA AGAACAGCCT TTGTTGTCGC ACATAGACTT
TCAACTATCA GAAATGCAGA TATAATTCTT GTCATGAACG AAGGTAAAAT TATAGAAATG
GGCAAACATG AGGAATTGCT TGAAAAAGGA GGATTTTACG CAGATATGTA CAGAAGTCAG
TTCCTTGGTG CGTTAGTCGA TGCATAA
 
Protein sequence
MEKREQTQKQ RPPRPMGPGA GGPAFARGGE KPKDFKKALK KLMTYLRPHQ YAIIAVFVIT 
IIATVLTIKA PKILGEATTE IFRVIMLRKT PFSGFLNTSM DFDKIFRILL NVALLYGISA
LLNFSQGYMM AGITQKIVKK MREDINDKLK RLPLSFYDHR SHGDIISRIT NDIDLISNTL
QQSLTQFISG IVTIVGITYM MLTINVKLTL LTLITLPLSA IATIVIAKYS QKYFAAQQKL
LGKLTGQVEE VYGGHIVVKA YGREKDELEK FTYVNTELYK ESKKAQFLTG IIMPMMNFIG
NLGYIIVAVG GGVLVTKKAI TIGDVQAFIQ YSRQFNQPII QISNIVNMIQ STLAASERVF
EILEENEEVP DKETAVELDK VDGNVKFESV KFSYYPEKPL IENLNIDIKS GQMVAIVGPT
GAGKTTLVNL LMRFYEIQGG SIRVDGIDIR DIKRYNLRKH FGMVLQDTWL FSGTIKDNIA
YGKTNATEEE IIKAAKMAHV HHFIMALPDG YNTTIGEDST NISQGEKQLI TIARAFLADP
SILILDEATS NVDTLTEVYI QKAMNDLLKG RTAFVVAHRL STIRNADIIL VMNEGKIIEM
GKHEELLEKG GFYADMYRSQ FLGALVDA