Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0144 |
Symbol | |
ID | 5451660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 146269 |
End bp | 147405 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640873891 |
Product | recombination factor protein RarA |
Protein accession | YP_001409668 |
Protein GI | 154248843 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCGTATTT CCATTGAGAC AAATAATCTT TTCTCCGCTA TCCTTGCCGG TCCTCCAGGC ACAGGCAAGA CATCTGTTTT GAACCTTATT AAGAAGTACA CAGATTACGA AATTGTCCAA TTAAATGCTG CGTTTACCTC CGTAGAAGAC ATCAAAAAAT GGGAAAAATA CGCGTACAAT ATGAAAGGGA TTAAGAATAT CCTATTGTTT ATAGACGAAA TTCACCGATT TAACAAAAAG CAGCAAGATG TATTCTTACC AGGAGTGGAA ACGGGTATAT ACACGCTCTA TGGCACAACC ACAGAAAGCC CACAACACGT ACTTAACCCA GCTCTTCTTT CAAGGTGTAG AGTATTAAGA TTTAAAAAAC TTTCCGAAAA AGATCTTCGA ATAATTTTGG AAAAAGCGAT ATCTTACGTT GGAATGGAAG TAACTGAGAA TGTTAAAGAT ATGATAATAA GGTCATCAAA CGGCGATGCA AGGTTTTTAA TAAATACTTA CGAAATACTA TCAAACATTG CAAAAACAAT TGGTAAAAAT TTAATAGACG AAGAGATATT TAAAATGTAC ACTGCGGATG AGCTAACAAA ATACACAGAT ACCGAACATT ACAATCTGGC TTCGGCGTTT ATAAAAAGTA TAAGAGGTAG TGATCCAGAT GCTGCGCTTT ATTACATGGC AAGAATGATA AATGGTGGGG AAGACCCAAG GTTCATTGCA AGAAGGCTTG TTATCCTTGC AAGTGAAGAT ATTGGGCTCG CCGATCCATT TGCGTTAGTT TTGGCAACTG CTACTATGCA GGCGGTAGAA AGCGTAGGAT TACCAGAATG CATTTTAAAC CTTTCTGAAT GTGTTATATA CCTTTCGCTT GCTCCGAAAA GCAACTCAAG CTATGAAGCG ATAAACAAAG CCCAACAAAT TGCTCAAAAA ACGATGAATT TGAATGTTCC AAAGCATCTA TTAAATATCG AAGGTAGTGG ATACAAATAT CCACATTCGT ATGGAGGATT CGTAAAACAA AGTTATTTAC CAAAAGAAAT AAAAGAGAGG TTTTATTATC CAAAAAATAT AGCAAAAGAA TCTAAAATTG CTGAAATATA TCGAAAACTT TGGCCAGAAA GATTCAATGA CATTTAA
|
Protein sequence | MRISIETNNL FSAILAGPPG TGKTSVLNLI KKYTDYEIVQ LNAAFTSVED IKKWEKYAYN MKGIKNILLF IDEIHRFNKK QQDVFLPGVE TGIYTLYGTT TESPQHVLNP ALLSRCRVLR FKKLSEKDLR IILEKAISYV GMEVTENVKD MIIRSSNGDA RFLINTYEIL SNIAKTIGKN LIDEEIFKMY TADELTKYTD TEHYNLASAF IKSIRGSDPD AALYYMARMI NGGEDPRFIA RRLVILASED IGLADPFALV LATATMQAVE SVGLPECILN LSECVIYLSL APKSNSSYEA INKAQQIAQK TMNLNVPKHL LNIEGSGYKY PHSYGGFVKQ SYLPKEIKER FYYPKNIAKE SKIAEIYRKL WPERFNDI
|
| |