| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0121 |
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| Symbol | |
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| ID | 5452921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 122950 |
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| End bp | 123216 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640873868 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_001409645 |
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| Protein GI | 154248820 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000257179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGG AGAAGTTCAA CCTTCAAGAT AGGTTTTTGA ATATTCTTAG GACCAAAAAA
ATTGAAGTAA AGGTTTATCT TGTCAATGGT TTTCAAACAA AGGGGATAGT AAGGTCGTTT
GATAATTTTA CAGTTCTTAT TGAGAGTGGT AAACAGCAAA CGCTTATTTA CAAGCATGCT
ATAAGCACTA TCCTTCCTGC GGAGTATATT ATGCTTATGA AGACGGAGGA AGAACAACAA
GAACAACAAG AAGCTGAACA AGAATAA
|
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| Protein sequence | MAKEKFNLQD RFLNILRTKK IEVKVYLVNG FQTKGIVRSF DNFTVLIESG KQQTLIYKHA
ISTILPAEYI MLMKTEEEQQ EQQEAEQE
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