Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0088 |
Symbol | |
ID | 5453299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 95422 |
End bp | 96363 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640873834 |
Product | ROK family protein |
Protein accession | YP_001409612 |
Protein GI | 154248787 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGTAG TAGGTATAGA TCTTGGTGGT ACATTTTTCA AAGTAGGTCT TGTTGATGCT GAGAGTGGTA AGATATTAAG AAAATTGGAA CGTGAAACAA AGGTTAACGA AGGTGGAGAT AGTGTTATCC AAAGGATGGC GGAAGCGGTA GAAGAAATTA CCGAAGGCAT TGAATATATT GGGGTTGGTA TTGGTTCACC AGGTTCAATA GATCACGATA AAGGGATAGT AAGGTTTTCG CCGAATTTCC CAGGGTGGGT AAATTTTGAA CTTGGGGGTT TACTTTCAAA TAAATTAAAT AAACCTGTAT TCGTTGAAAA CGATGCTAAT GCATTTGTGC TTGGTGAAAA ATGGTTTGGT GCGGGCAAAG GTTATAATCA TATAGTTGCG CTTACACTTG GTACAGGTGT CGGTGGTGGT GTCATATCCC ATGGAATGCT TATAACAGGT CACAACGGTA TAGGTACAGA ATTAGGGCAT GTTATAATAG AACCAAATGG TCCACAATGT GGATGTGGTA ATTACGGATG TCTCGAAGCA CTCGCAAGTG CAACCGCTAT CAGAAGGATG GCTTTAGAAG GACAGAAAAA ATTTCCAGAA TCTGTTATTT TTCAATCAGA AAATGTCGAC GCCAAATCTG TTTTTGAAGC AGCGAAGATG GGAGATGGCT TGGGAAAAGC TATAGTCGAT AGAGTTGTGA ACGCACTTTC AATTGGCATT GCCAATTTTA TACATATATT CAACCCTGAA ATCATTGTTG TTGGTGGAGG AGTTTCCAGG GCGGGAGATA TTTTATTTGA GCCTATAAGG GAAAAAGTGC AACATTTAGT TATGCCATCT TTTAAGGGAA CTTACAAAAT TGTTCAAAGT CCATTGGTAG AAGAAGCCGG CATTCTTGGT GCAGCATCGG TTATTTTGCA GAATGTAAAT AAACCAAAAT AA
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Protein sequence | MYVVGIDLGG TFFKVGLVDA ESGKILRKLE RETKVNEGGD SVIQRMAEAV EEITEGIEYI GVGIGSPGSI DHDKGIVRFS PNFPGWVNFE LGGLLSNKLN KPVFVENDAN AFVLGEKWFG AGKGYNHIVA LTLGTGVGGG VISHGMLITG HNGIGTELGH VIIEPNGPQC GCGNYGCLEA LASATAIRRM ALEGQKKFPE SVIFQSENVD AKSVFEAAKM GDGLGKAIVD RVVNALSIGI ANFIHIFNPE IIVVGGGVSR AGDILFEPIR EKVQHLVMPS FKGTYKIVQS PLVEEAGILG AASVILQNVN KPK
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