Gene Fnod_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0087 
Symbol 
ID5452827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp94226 
End bp95290 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content33% 
IMG OID640873833 
ProductDNA integrity scanning protein DisA 
Protein accessionYP_001409611 
Protein GI154248786 
COG category[R] General function prediction only 
COG ID[COG1623] Predicted nucleic-acid-binding protein (contains the HHH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGACG TTCTTGACCA AGAATTAATG GAAAAAATAC GTATGGTATC TCCAGGAACA 
AGATTGAGAA AGGCATTAGA TGATATTATG CAAGCACAAA CAGGTGCATT AATTGTGTTT
ATAAACGAAG AAGATATGAA AAATAAGCCC GGTATTTTTC AAATTGGTTT TAAAATAGAT
TGCCCATTCA CACCTGAAAA ACTATACGAA CTTTCAAAAA TGGATGGAGC TATAATAATT
GATGAATCGA TTAGCAGAAT AATTGCAGCC AACGTACACG TAATACCAGA TTCATCTATA
CCAACAAACG AAACAGGTAC ACGCCACAGG ACAGCTGAAA GAATCGCAAA ACAACTTGGA
ATTATGGTCT TAGCTGTTTC AAAAAGAAGA AATGTCGTCA CACTATACTA CAAAGACAAA
AAATATGTGT TTGAAAATAT AAATTTCGTT CTAACCAAAG TCGGTCAAAC AATAAATGCT
TTAGAGAGAT TTAGGGAAGA ATTTGACAAA AACCTATTAA CTTTAGACAA ATTAGAAGTT
GAAGGTAACG TCCCATTGGA TTTTGTATGT GAAACATTGA TGAGAGGAAT AGAAATAAAG
GTTATATCGA ATAATATATC TGTCAATATA ATTGAGCTCG GTAACGAAGG AAGGCTTTCT
TCTTTAAGGC TTCGCGAAGT GTTGAAAGAT TTGAATGAGA TACTAACTTT GATGATAATG
GATTATTCAA AAAGGGATTT AAGTGAAGAA GAAGCTAAAA ATGTATTGGA AAGCATTACA
AAATTAGAGC ATAGATTATT ACATATCGCA AAAGCGCTTG GATATGATTT AAATAATCAG
CAACAAGTAT CTGAAACATT TGTTAACCCG AGAGGATACA GGGTATTAAG AAGAGAAATT
CACATACCAA TCAATATTTC ACAAAATCTT GTAAAATCAT TTCATTCTCT ATCTAACATC
GTTAAAACCG ATGCAAATAA CTTACAAAAA GTTGATGGCG TTGGTATGAA GCGCGCAAAA
GCAATTATAA AAACGCTAAG ACAAATGAAA AGAGGGAGAG ACTGA
 
Protein sequence
MADVLDQELM EKIRMVSPGT RLRKALDDIM QAQTGALIVF INEEDMKNKP GIFQIGFKID 
CPFTPEKLYE LSKMDGAIII DESISRIIAA NVHVIPDSSI PTNETGTRHR TAERIAKQLG
IMVLAVSKRR NVVTLYYKDK KYVFENINFV LTKVGQTINA LERFREEFDK NLLTLDKLEV
EGNVPLDFVC ETLMRGIEIK VISNNISVNI IELGNEGRLS SLRLREVLKD LNEILTLMIM
DYSKRDLSEE EAKNVLESIT KLEHRLLHIA KALGYDLNNQ QQVSETFVNP RGYRVLRREI
HIPINISQNL VKSFHSLSNI VKTDANNLQK VDGVGMKRAK AIIKTLRQMK RGRD