Gene Fnod_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0080 
Symbol 
ID5453327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp86229 
End bp86987 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content36% 
IMG OID640873826 
Producthypothetical protein 
Protein accessionYP_001409604 
Protein GI154248779 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.158966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTAT TCATGACTGA TTGGGGCAGT TCTCATTATG TTGGTATATG CAAAGGAGTA 
ATGAGAAGTA TAACAAATGA TGAAATAGTT GATTTAACTC ACTCAATTAC GCCGTACAAC
GTTAGAGAAG CTATGTATAT TTTAGATAGA AGTGCAGATT GGTTCCCCGA AAAGAGTGTT
TTTTTAGTAG TCGTCGACTA CGGTGTTGGA ACAGCCAGAA AAGCAATTGC AGTGGAAACC
GACAAATATT ATTTCGTGGC TCCTGATAAC GGAGTTTTGA CACTCGTACT TGAACGTTAC
CAACCGAAAA GCATAATCGA TTTGGTTAAT AAAAAATATC ATCTTGGAAG CTCGAAAACA
TTCCATGGAA GAGATATATT CTCTCCTGCT GCTGCGTATA TAACAAAAGG TATTTTTAAC
GAACTAGGCA CAAGATTACC TAATTACGCA ACGATACCAT ATAGGAAAGC CCATAAATCA
AACAATGTAA TACACGGTGA AATTGCGTAT TTTGACAGAT TTGGAAACGT TGAAACTAAC
ATACCATTCT CCTGGATAGC TGAAAAAGAT TCCGTAAATC TAAAAATAGG AAATAAAACA
TATCAAATTC CTGTCGTTGA AACGTATGCG GATGTTGATG AAGGCGAACT TTTAGTGCAC
GAAGATAGCA CAGGGTATGT AGAAATAGCC ATAAACAAAG GAATTGCACG TGAAAAATTA
CGTTGTATTG AAGGATGTGA AATAGAAGTT CACATTTAA
 
Protein sequence
MIVFMTDWGS SHYVGICKGV MRSITNDEIV DLTHSITPYN VREAMYILDR SADWFPEKSV 
FLVVVDYGVG TARKAIAVET DKYYFVAPDN GVLTLVLERY QPKSIIDLVN KKYHLGSSKT
FHGRDIFSPA AAYITKGIFN ELGTRLPNYA TIPYRKAHKS NNVIHGEIAY FDRFGNVETN
IPFSWIAEKD SVNLKIGNKT YQIPVVETYA DVDEGELLVH EDSTGYVEIA INKGIAREKL
RCIEGCEIEV HI