Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0006 |
Symbol | |
ID | 5452823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 6698 |
End bp | 7732 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640873756 |
Product | inner-membrane translocator |
Protein accession | YP_001409536 |
Protein GI | 154248711 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0191826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT TTATCGAAAA TATTGCTGTA CCTTTGATTT CTGTTTTGAT TGCTTTAATT ATCTCTGCTT TTATTATCCT TGCGATAGGT AAGAATCCTA TACTTGCTTA CGGTAAATTG CTTAACGGTG CTTTTGGAAG TAAGCAAGCG ATAATTGATA CACTTATAAA AACGACTCCT TTGATACTCA CAGGTTTGGC GGTCGGGTTT GGATTTAGAG CAGGTGTTTT TAACATCGGT GCTGAAGGTC AAATGGCTAT GGGTGCTCTT GTTGCTGCAA GTGTCGCAAG TAATTTTGGA GGTCTTCCAC CAGCTGTTGC AATTCCACTT ACTATGCTTA TAGGTATGGC CGCTGGTGCC GGTTGGGCTG CGATAGCTGG TTTTCTTAAA GCCAAAACAG GAGCTCATGA GGTTGTTACA ACTATTATGT TGAACTGGAC AACCACTTAT ATTGCTTCAT TTATGGTTAC AGGTCCGCTT GCAACGGGTT CTGGAACGCC TAAGAGCCCT GAAATATCTA CTTCAGCTCA ATTGCCAATT TTGATGAAGG TTGGAGCTAT GGAACTTAGT TCTGGAATAA TAATATCAAT TCTTGCAGCT ATATTTATGT ACGTTTTCCT TAATAAAACG ACAGTTGGTT ACGAAATAAA AGCTGTGGGA TTCAATCCTT ACGCTGCAGA ATATGGTGGT ATTAGTGTTG CAAAAAATGT TGTATTAGCG ATGGCCATAA GTGGTGCGCT TGCTGGATTA GCAGGTGTTA CTGAATTAAT GGGAGTGCAT CACAGGTTTT TAGGTGAGCT TTCTGGTGGT AAAGGTTTTG ATGGTATCAG TATAGCGTTG ATAGGTCAGA ATAATCCAAT TGGAATAATC TTTGCTGCGT TATTAATTGG TGCTCTTAGA ACAGGTAGTA ACGAGATGCA ATTCATGGGA GTTTCAAAGT ATATAGTTAT AATTGTTCAA GCTATTGTTA TTTTCCTTGT AGCAGCTGAT AGAATTGTAC GCACTATTTA TCTTAGAAAG AAGGTGAAAG CATGA
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Protein sequence | MKKFIENIAV PLISVLIALI ISAFIILAIG KNPILAYGKL LNGAFGSKQA IIDTLIKTTP LILTGLAVGF GFRAGVFNIG AEGQMAMGAL VAASVASNFG GLPPAVAIPL TMLIGMAAGA GWAAIAGFLK AKTGAHEVVT TIMLNWTTTY IASFMVTGPL ATGSGTPKSP EISTSAQLPI LMKVGAMELS SGIIISILAA IFMYVFLNKT TVGYEIKAVG FNPYAAEYGG ISVAKNVVLA MAISGALAGL AGVTELMGVH HRFLGELSGG KGFDGISIAL IGQNNPIGII FAALLIGALR TGSNEMQFMG VSKYIVIIVQ AIVIFLVAAD RIVRTIYLRK KVKA
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