| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0005 |
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| Symbol | |
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| ID | 5453000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 5136 |
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| End bp | 6701 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640873755 |
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| Product | ABC transporter related |
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| Protein accession | YP_001409535 |
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| Protein GI | 154248710 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0667369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTCAA AAGTTCATGA CATGGTGAAA AGCGAAGAGT ACGCTGTAGA GATGATCGAT
ATTACAAAGA GGTTTCCGGG AGTTTTGGCA AACGATAAGG TTACCATACG TATAAAAAAA
GGTGAGGTTC ATGCTATTGT CGGTGAGAAC GGTGCTGGAA AGAGTACATT GATGAATCAA
CTCTACGGTC TATACCATCC AGATAGTGGA GAAATAAGAA TTTTTGGCGA AAAAAAGGTA
TTTGCTGGAC CAAGAGATGC GATAAAAGCA GGTATAGGTA TGGTCCACCA ACACTTTATG
CTTGTTGATA CATTAACTGT TGCAGAGAAC GTTGTTCTTG GAAGTGAGCC AAATAAAGGG
CTGAATTTTG ACCTTCAAAA GGCAAGGAAA GAAGTTAGAG AGTTATCGGA AAAATATGGG
CTTTATGTTG ATGTTGACGC AAAAATAGAG GATATACCAG TTGGTATGCA GCAGAGGGTT
GAGATTATAA AAACATTGTA CCGTGGTGCG AATATAATTA TTTTGGACGA ACCTACCGCT
GTTTTGACAC CGCAAGAAGT TGAGGAACTA TTTGTTATTA TGAGAAATCT TCAAAATGCT
GGAAAGACTA TTTTATTTAT TTCACATAAA TTAAATGAAG TTATGGAAAT AAGCGATAGG
ATAACAGTCA TGCGTGGTGG TAAGGTAACG GCTGAGTTAA TTACTAAAGA AACAAACGAA
AGGGAAATTG CAAGAGCGAT GGTCGGAAGA GACGTTGTAC TCAAACTTGA TAAATCTCCT
CACAGTCCAA AAGAAGTGAT TTTTGAGGTT AAAGACCTTT GGGTTAAAGA CAACAGACAC
TTAGATGCTG TTAAAGGTGT TACATTTAAC GTAAGGCGTG GTGAGATTGT TGGAATTGCT
GGTGTTGCTG GTAACGGTCA AACAGAACTT GTGGAAGCAA TTACAGGTTT AAGGAGAGTA
GAAAAGGGGC AATTAATCTT TGAAGGTAAA GATGTTACCA ACGCTCATCC AAGGCAGTTA
AGAGATATGG GCATGACACA TATAGCCGAA GATAGGTTAA AACACGCTCT TATAAAACCT
TTCCCTGCTT ATTATAATGC AATATTAGGA AGACATATAA AGAAACCATT TGCTAGAGGT
GTGTTTTTAA ATCACAAAGA GATAAAAAGG TATACAATGG AACTTATGGA AGAATTTGAT
GTAAGGCCTA GAATAATAGA ACATCTTGGA GGTAATTTTT CAGGAGGTAA CCAACAGAAA
CTTGTTGTTG GCAGAGAGAT AAAAGCTGGG CCAAAATTTA TGGTCGTCGC CCAACCAACA
AGGGGACTTG ATGTTGGAGC GATTGAGTTC ATTCATAGAC AGATTTTAAA AATGAGAGAG
CACGATGTTG GGATATTGTT AATTTCTATG GAGTTGGAAG AAATATTCTC ATTGAGCGAT
AGAATTTTAG TGATGTACGA AGGACAGATA ATGGGCGAGG TTAAACCTCA GGAAACGACT
ATAGAAGAAG TTGGTCTTAT GATGGCCGGT AAAAGATTAG AAGAAATAAG AGGTGGTAAA
AAATGA
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| Protein sequence | MNSKVHDMVK SEEYAVEMID ITKRFPGVLA NDKVTIRIKK GEVHAIVGEN GAGKSTLMNQ
LYGLYHPDSG EIRIFGEKKV FAGPRDAIKA GIGMVHQHFM LVDTLTVAEN VVLGSEPNKG
LNFDLQKARK EVRELSEKYG LYVDVDAKIE DIPVGMQQRV EIIKTLYRGA NIIILDEPTA
VLTPQEVEEL FVIMRNLQNA GKTILFISHK LNEVMEISDR ITVMRGGKVT AELITKETNE
REIARAMVGR DVVLKLDKSP HSPKEVIFEV KDLWVKDNRH LDAVKGVTFN VRRGEIVGIA
GVAGNGQTEL VEAITGLRRV EKGQLIFEGK DVTNAHPRQL RDMGMTHIAE DRLKHALIKP
FPAYYNAILG RHIKKPFARG VFLNHKEIKR YTMELMEEFD VRPRIIEHLG GNFSGGNQQK
LVVGREIKAG PKFMVVAQPT RGLDVGAIEF IHRQILKMRE HDVGILLISM ELEEIFSLSD
RILVMYEGQI MGEVKPQETT IEEVGLMMAG KRLEEIRGGK K
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