Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0005 |
Symbol | |
ID | 5453000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 5136 |
End bp | 6701 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640873755 |
Product | ABC transporter related |
Protein accession | YP_001409535 |
Protein GI | 154248710 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0667369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATTCAA AAGTTCATGA CATGGTGAAA AGCGAAGAGT ACGCTGTAGA GATGATCGAT ATTACAAAGA GGTTTCCGGG AGTTTTGGCA AACGATAAGG TTACCATACG TATAAAAAAA GGTGAGGTTC ATGCTATTGT CGGTGAGAAC GGTGCTGGAA AGAGTACATT GATGAATCAA CTCTACGGTC TATACCATCC AGATAGTGGA GAAATAAGAA TTTTTGGCGA AAAAAAGGTA TTTGCTGGAC CAAGAGATGC GATAAAAGCA GGTATAGGTA TGGTCCACCA ACACTTTATG CTTGTTGATA CATTAACTGT TGCAGAGAAC GTTGTTCTTG GAAGTGAGCC AAATAAAGGG CTGAATTTTG ACCTTCAAAA GGCAAGGAAA GAAGTTAGAG AGTTATCGGA AAAATATGGG CTTTATGTTG ATGTTGACGC AAAAATAGAG GATATACCAG TTGGTATGCA GCAGAGGGTT GAGATTATAA AAACATTGTA CCGTGGTGCG AATATAATTA TTTTGGACGA ACCTACCGCT GTTTTGACAC CGCAAGAAGT TGAGGAACTA TTTGTTATTA TGAGAAATCT TCAAAATGCT GGAAAGACTA TTTTATTTAT TTCACATAAA TTAAATGAAG TTATGGAAAT AAGCGATAGG ATAACAGTCA TGCGTGGTGG TAAGGTAACG GCTGAGTTAA TTACTAAAGA AACAAACGAA AGGGAAATTG CAAGAGCGAT GGTCGGAAGA GACGTTGTAC TCAAACTTGA TAAATCTCCT CACAGTCCAA AAGAAGTGAT TTTTGAGGTT AAAGACCTTT GGGTTAAAGA CAACAGACAC TTAGATGCTG TTAAAGGTGT TACATTTAAC GTAAGGCGTG GTGAGATTGT TGGAATTGCT GGTGTTGCTG GTAACGGTCA AACAGAACTT GTGGAAGCAA TTACAGGTTT AAGGAGAGTA GAAAAGGGGC AATTAATCTT TGAAGGTAAA GATGTTACCA ACGCTCATCC AAGGCAGTTA AGAGATATGG GCATGACACA TATAGCCGAA GATAGGTTAA AACACGCTCT TATAAAACCT TTCCCTGCTT ATTATAATGC AATATTAGGA AGACATATAA AGAAACCATT TGCTAGAGGT GTGTTTTTAA ATCACAAAGA GATAAAAAGG TATACAATGG AACTTATGGA AGAATTTGAT GTAAGGCCTA GAATAATAGA ACATCTTGGA GGTAATTTTT CAGGAGGTAA CCAACAGAAA CTTGTTGTTG GCAGAGAGAT AAAAGCTGGG CCAAAATTTA TGGTCGTCGC CCAACCAACA AGGGGACTTG ATGTTGGAGC GATTGAGTTC ATTCATAGAC AGATTTTAAA AATGAGAGAG CACGATGTTG GGATATTGTT AATTTCTATG GAGTTGGAAG AAATATTCTC ATTGAGCGAT AGAATTTTAG TGATGTACGA AGGACAGATA ATGGGCGAGG TTAAACCTCA GGAAACGACT ATAGAAGAAG TTGGTCTTAT GATGGCCGGT AAAAGATTAG AAGAAATAAG AGGTGGTAAA AAATGA
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Protein sequence | MNSKVHDMVK SEEYAVEMID ITKRFPGVLA NDKVTIRIKK GEVHAIVGEN GAGKSTLMNQ LYGLYHPDSG EIRIFGEKKV FAGPRDAIKA GIGMVHQHFM LVDTLTVAEN VVLGSEPNKG LNFDLQKARK EVRELSEKYG LYVDVDAKIE DIPVGMQQRV EIIKTLYRGA NIIILDEPTA VLTPQEVEEL FVIMRNLQNA GKTILFISHK LNEVMEISDR ITVMRGGKVT AELITKETNE REIARAMVGR DVVLKLDKSP HSPKEVIFEV KDLWVKDNRH LDAVKGVTFN VRRGEIVGIA GVAGNGQTEL VEAITGLRRV EKGQLIFEGK DVTNAHPRQL RDMGMTHIAE DRLKHALIKP FPAYYNAILG RHIKKPFARG VFLNHKEIKR YTMELMEEFD VRPRIIEHLG GNFSGGNQQK LVVGREIKAG PKFMVVAQPT RGLDVGAIEF IHRQILKMRE HDVGILLISM ELEEIFSLSD RILVMYEGQI MGEVKPQETT IEEVGLMMAG KRLEEIRGGK K
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