| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_5086 |
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| Symbol | |
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| ID | 5420497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009717 |
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| Strand | - |
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| Start bp | 306952 |
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| End bp | 309324 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640873740 |
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| Product | type IV secretion/conjugal transfer ATPase |
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| Protein accession | YP_001409520 |
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| Protein GI | 154243947 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCTTGC CTAACGTCGT CATTCTCAAA ACCCGCGAGC TCGAGCCCGA GACCTTCATC
CCGTATGTCC GTCACGTGGA CGAGACGACG ATCGCGCTCG ATTCCCGGGC GCTGATGGTC
ATGATTGCCC TCGACGGCAT ATCGTTCGAG ACGGCCGATC CGCTCGAACT CAACGGCCTT
CATCGCGACC TCAACACGCT CTACCGCAAC CTCGCGGACG AACGCCTCGC GCTTTGGACC
CACATCCTCC GTCGTCGCGA CAACGACTAT CCCGAGGGAG CGTTTGCCAA TCCCTTCTCC
GCTGCCCTGA ACGCGAAATA TCGCGCCCGC ATGGTAGAGG AGGATCTCTT CCGCAACGAC
CTCTATCTGA CCCTGCTGTG GTATCCGACC CGCGATCCCG CTGAGAAGAT CTCGAAGCTC
CTGGGCCGCC TTCGCCGGGC GCGCCGCGGG AGCGTAGAGC TCGACGAGGA GGCGCTCAAG
CAGTTGCGCG ACAAGGTCAC CGACGTGACG GCCGGCCTCA AGCGGTTCCA GCCACGTGTT
CTTTCCCTCT ACGAACACGA TGGTCTTCTG TTTTCCGAGC CGAGTGAGGT CCTGCACCAG
ATCATCGGCG GCCGGCGGGA ACGAGTGCCC CTCACGGAGG GGCGGGTTTC GTCAGCGATC
TATTCCGACC GCGTCATCAT CGGTCGCGAG ACGGTGGAGA TCCGCCATGA GGCTGAGACC
CGGTATGCAG GGATCTTCAG CTTCAAGGAA TATCCCGCCC GGACCAGGCC CGGCATGCTC
GCTGGCGTCC TCACCACGCC GTTCGAGCTC ATCCTGACGC AGTCCTTCGC GTTCGCCTCA
AAGGCCGATG CCCGGACCAT CCTGGGACGC AAGCAGAACC AGATGGTGAG CGCCGGCGAC
AAGGCGAATT CGCAGGTCGA TGAGCTCGAT GGCGCCCTGG ACGAACTGGA ATCCAATCGC
TTCGTGCTGG GCGAGCATCA CCTGACGCTG TCGGTCTTCG CCCCATCGGT GAAGGACCTC
ACCGACAATC TGGCGAAGGC ACGCTCTCAT CTGACCAACG GCGGTGCCGT CGTGGCACGC
GAGGACCTTG GCCTCGAAGC CGCCTGGTGG GCGCAGCTGC CTGGCAATTT CCGCTACCGG
GCCCGCTCTG GTGCGATCAC CTCGCGCAAC TTTGCCGCGC TGTCGCCATT TCACTCCTAT
CCGGTCGGCC GGAAGGACGG CAATGAATGG GGGCCGGCCG TCGCGATGCT CAAGACGGCC
TCCGGCTCGC CGTTCTATTT CAACTTCCAC CATGGCGATC TCGGCAACAC CTTCGTGTGC
GGCCCCTCTG GATCCGGCAA GACCGTTATC CTGAACTTCA TGCTCTCGCA GCTCGAGAAG
CACGATCCCC ACATGGTGTT CTTCGACAAG GACCGTGGCG CCGATCTCTT CGTGCGGGCG
GCGGGCGGCA CGTATCTGCC TCTGAAGAAT GGGACGCCAA CCGGCTGCGC GCCGCTGAAG
GGGCTTGAGC TCACACCGGA GAACAAGGTG TTCCTGGCGC AATGGATCGC CAAGCTCGTC
GGCTCAAAGT CGCGCGAGCT TTCCGTGAGT GACCTGCGCG ACATCGCCGG CGCCGTCGAC
GGCCTCGCGG ACCTCCCGGT CCAGCGGCGC ACCATCGGCG CGTTGCGCAC CTTCCTCAAC
AACACCGACC CGGAGGGCAT TGCCGCCCGG CTGCGGCGTT GGGAGAGGGG AGGGCCCCTC
GGCTGGGTCT TCGACAACGA GACCGACGAC ATTGGCATCG GCGCCAAGTT CCTCGGCTAC
GACATGACGG ATTTCCTCGA CAATGAGGAG ATCCGCACGC CGCTCATGGC CTACCTGTTC
CACCGGGTGG AGCAGCTGAT CGACGGCCGC CGCATCATCA TCGTTATCGA CGAGTTCTGG
AAGGCGCTGC TGGACGAGGG ATTTCGCGAC CTCGCCCAGA ACAAGCTCAA GACCATCCGG
AAGCAGGGCG GCCTCATGCT CTTCGCGACG CAGAGCCCAC GCGATGCGAT CGCCTCGCCG
ATCGCCCACA CCATCATCGA GCAGTGCCCG ACCCAGATCT TCATGCCGAA CCCGCGTGGC
AGCCACGCCG ATTACGTGGA CGGCTTCAAG CTCACCGAGC GGGAATATCA GCTCATCGCG
CGCGAGCTGT CCCCTGAAAG CCGCCGCTTC ATTGTCAAGC AGGGGCACAA CAGCGTCGTC
GCCGAGCTGA ACCTCGCTGG CTTCGACGAC GAGCTCGCCG TCCTCTCCGG CCGCACCGCC
AATGTCGAGC TGGCCGACGC GATCCGTGCG GAGGTCGGCA GCGGTCAGGA GGACTGGCTC
CCCCTATTCC AACAAAGAAG GAGTCCCGGC TGA
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| Protein sequence | MALPNVVILK TRELEPETFI PYVRHVDETT IALDSRALMV MIALDGISFE TADPLELNGL
HRDLNTLYRN LADERLALWT HILRRRDNDY PEGAFANPFS AALNAKYRAR MVEEDLFRND
LYLTLLWYPT RDPAEKISKL LGRLRRARRG SVELDEEALK QLRDKVTDVT AGLKRFQPRV
LSLYEHDGLL FSEPSEVLHQ IIGGRRERVP LTEGRVSSAI YSDRVIIGRE TVEIRHEAET
RYAGIFSFKE YPARTRPGML AGVLTTPFEL ILTQSFAFAS KADARTILGR KQNQMVSAGD
KANSQVDELD GALDELESNR FVLGEHHLTL SVFAPSVKDL TDNLAKARSH LTNGGAVVAR
EDLGLEAAWW AQLPGNFRYR ARSGAITSRN FAALSPFHSY PVGRKDGNEW GPAVAMLKTA
SGSPFYFNFH HGDLGNTFVC GPSGSGKTVI LNFMLSQLEK HDPHMVFFDK DRGADLFVRA
AGGTYLPLKN GTPTGCAPLK GLELTPENKV FLAQWIAKLV GSKSRELSVS DLRDIAGAVD
GLADLPVQRR TIGALRTFLN NTDPEGIAAR LRRWERGGPL GWVFDNETDD IGIGAKFLGY
DMTDFLDNEE IRTPLMAYLF HRVEQLIDGR RIIIVIDEFW KALLDEGFRD LAQNKLKTIR
KQGGLMLFAT QSPRDAIASP IAHTIIEQCP TQIFMPNPRG SHADYVDGFK LTEREYQLIA
RELSPESRRF IVKQGHNSVV AELNLAGFDD ELAVLSGRTA NVELADAIRA EVGSGQEDWL
PLFQQRRSPG
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