| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_5081 |
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| Symbol | |
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| ID | 5420468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009717 |
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| Strand | - |
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| Start bp | 304098 |
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| End bp | 304769 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640873735 |
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| Product | VirB8 family protein |
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| Protein accession | YP_001409515 |
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| Protein GI | 154243942 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.477403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGACGA ACGAAAGCCT TAAAAGTTAT TTCGAGAAAG CCCGCCGGTT CGATCAGGAC
CGGATGATCC GGGCGGAGCG CTCGACCCGG GTCGCCTGGT TCGTGGCGAT CTGCGCCAGC
ATCCTGGCGG CGGCCGCGGT CTTCGCGGTT GCGGGTCTGA CGCCGCTAAA GACGGTGCAG
CCCTTTGTCG TCAGGGTCGA CAATTCCACA GGCATCGTCG ATGTGGTCTC GGCCCTGACC
GCGACCGCCG GAACCTACGA CGAGGCCGTC ACCAAGTATT TCGCGGCGCG ATACGTCCGG
GCGCGGGAGG CCTATGTCTG GAGCGAGGCG GAAGAGAACT TCCGGACCGT CGCCCTTCTT
TCCACCCAGG CCGAGCAGCA ACGGTTCGCC GCGCTCTATC GCGGCAGCAA TCCGGAATCT
CCCCAGAACA TCTATGTCCG CAGCGCCACT GCCCGGATCA ACATCGTCTC GATCTCGCTG
ATCAACCCTC ACGTGGTGTC GGTCCGCTAC ATCCGCACCG TCACGCGCGG AGAGGATGTC
CGCACCACCC ATTGGGTGGC AACGTTGACC TTCGCCTATG TCAACGCGCC CATGTCCGCG
ACGGACCGGT TGGTCAATCC GCTCGGCTTT GTCGTGAGCG AGTACCGGGC CGACCCGGAG
GCCATCAATT GA
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| Protein sequence | MVTNESLKSY FEKARRFDQD RMIRAERSTR VAWFVAICAS ILAAAAVFAV AGLTPLKTVQ
PFVVRVDNST GIVDVVSALT ATAGTYDEAV TKYFAARYVR AREAYVWSEA EENFRTVALL
STQAEQQRFA ALYRGSNPES PQNIYVRSAT ARINIVSISL INPHVVSVRY IRTVTRGEDV
RTTHWVATLT FAYVNAPMSA TDRLVNPLGF VVSEYRADPE AIN
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