Gene Xaut_5005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_5005 
Symbol 
ID5420374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp225812 
End bp226846 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content63% 
IMG OID640873660 
Producthypothetical protein 
Protein accessionYP_001409440 
Protein GI154243867 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.238199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGGGA GGTGGGATGC CGTCTGCGCC GCCCATGCCG ATGCCAAAGT GGTGTCTGTA 
AACCTTTCGG GTATCACTCG CATGGACACG TTCGGAGCGA TTCTCCTCGA GCGGCTGTGC
GGGGCGTGGG AGCAAGAAGG CAGCGTGCCG CAGGTGAGCA GTCTTGACCC GCGTTATCAG
CGCCTCATGC AGGAACTCGA GCGGAGTGAT AGCCGGCCGC ATCCGCAGAC TCGGAGGAGC
GAAGGCATCC TGGAGCGATT GGGCCATGAG GTGGTCAACA CCGCCAAGGA TGGGCTCGAC
CTGCTTAATT TCATCGGCGC GGTGGTTTCG GCCATGGGGC GGGTGGCGGT ACGGCCGCGG
TCATTCCGCT TCACCTCCAC GGTCGCCCAA CTCGACCGGG TGGGCTTTCG TGCCGTTCCG
ATTATCCTGC TCATCACCTT CCTCGTCGGC TCCATCATCG CCCAGCAGAG CATCTTCCAC
TTCCGCCGTT TTGGCGCCGA CATCTTTGTG GTGGACATGG TGGGCGTGTT GGTGCTTCGC
GAGCTCGGCG TGCTCATCGT GTCGATCATG ATCGCCGGCC GTTCAGGTAG TGCCTACACC
GCAGAGCTCG GCTCCATGCG CATGCGCGAG GAGGTGGATG CGCTCAAGGT GATGGGCCTC
GATCCCATCG AAGTGCTGGT GGTGCCGCGC ATTCTCGCGC TTATCATCGG CTTACCGTTG
CTCACCTTCC TGGGCTCGAT GGCGGCGCTC ATCGGTGGTG GCCTGGTGGC CTGGTTCTAT
GGCGGCATCA CCCCGAATGT CTTCATCGAC CGCCTGAAGC AGGCCATCGA CCTCACTCAG
TTCGAGGTGG GCATGTACAA GGCGCCCTTC ATGGCCGCGG CAATCGGCCT CGTGGCCTGC
CTTGAAGGCC TGAAGGTGGG CGGCAGCGCC GAATCCCTCG GCCAGCACAC GACGGCCTCC
GTGGTGAAGG CGATCTTCCT CGTCATCGTC ATGGACGGTC TCTTCGCGGT CTTCTTCGCG
TCCATCAAAA TGTGA
 
Protein sequence
MSGRWDAVCA AHADAKVVSV NLSGITRMDT FGAILLERLC GAWEQEGSVP QVSSLDPRYQ 
RLMQELERSD SRPHPQTRRS EGILERLGHE VVNTAKDGLD LLNFIGAVVS AMGRVAVRPR
SFRFTSTVAQ LDRVGFRAVP IILLITFLVG SIIAQQSIFH FRRFGADIFV VDMVGVLVLR
ELGVLIVSIM IAGRSGSAYT AELGSMRMRE EVDALKVMGL DPIEVLVVPR ILALIIGLPL
LTFLGSMAAL IGGGLVAWFY GGITPNVFID RLKQAIDLTQ FEVGMYKAPF MAAAIGLVAC
LEGLKVGGSA ESLGQHTTAS VVKAIFLVIV MDGLFAVFFA SIKM