| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4984 |
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| Symbol | |
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| ID | 5420345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009717 |
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| Strand | + |
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| Start bp | 203464 |
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| End bp | 204780 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640873640 |
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| Product | integrase domain-containing protein |
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| Protein accession | YP_001409420 |
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| Protein GI | 154243847 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCC AGGACGGGGC GCTATACGAT CCTGCTCTGG ATCGCTTTTT TCGCGATCTT
CCTCTCAACG GCGTTCGCTC ACGCCATTCC CTTCGTGCCT ATGGCTACGA TGTTTTGGTC
TGGGCTCGTT TTCTTTCGGA AGCCTGCGCC AAGACGATAT GGCAAGCCGA CCGGCATGAC
GTCCTTGCCT ATCATCGCGT CCGCCGCCGC GCCGACGCGG GACAACGCAT TTCCGCTGCG
TCCTGGAATC GCGCCGTTGC CTGTCTCGAT CGGCTATATC GCTGGGGTGT GCAGGAAGGA
CTGATTGCAG AAGCACCCTT CACGCATCGC TCGGTCTGGA GGCAGGGGTA CGCTGGGCGC
CGGTCGCAGG TGGCAGCGCG GAACGATGCC TATGAACCTG CCGCGCGTCG AGCGGACGTC
AGTTTCGTCA CGCTCGAGGA CTATCGGCGC TTTCGGGATG TCGGCCTCAA GGCGCTTTTG
CCTGACGGCC GCACACGCCC CGGCGCCCGC GATCGCAACG GTATCCGCAA TGCGTTGTTC
GCCGATCTCC TCGTGACCAC AGGGCTTCGG CTGGAAGAAG CATCATCCCT CTTCACCTCC
GATCTCGTTT TCGCCGATCA GCGTCCGGGC CGTCAGGTCT GGCTGGACCT GCCGGATGCC
CAGACCAAGG GCGATCGCGG TCGCCAGATC CTCGTTCCCG CTCGACTGCT CGAACAGGTG
CGCGCCTATG TCGATGTCGA GCGTGCTCAT GCCATCACGA AGTTTCAGCA GCGGTCAGGA
TGGCAGTCGA TCGACCGTCC GATCTTCGTT CATCGCGAGC GGCACGCGGC CCGGCTGCGA
CTGCTGGACG GTGGGGATAT CGCTCTCGAT CTGCTCGACC CCGAGGAACG TTGCCGGATT
ATTGTCTGCG ACAGCGACGG CACGCCGAGC GAACCGGCGG CATTGTGGCT TTCGGAGGTC
GGCATGCCGG TGCAGCCGAA CTCGTGGGAA GTCATTTTCG CCCGCGCCTC CAGCCGGTGC
CGGTCCTTCG GGTTAGATAT CAACATCAGC CCGCACCAGC TCCGCCACAC CTTTGCCGTT
CACATGCTGG CGATGCTCAT TCAGCACCGT ATCCGTGACG CTGCGCTTCC TGCCGGCTCG
ATGGAAGGAT ACCGGCAGAT GCTCGGTGAT CCTCTCCAGC AGGTGCAACG GCTTCTCGGC
CATGCCAGCC TGACAACGAC CTATATTTAC CTCGACCACA TAGCGACGCG CGCCGATACC
GTCGATGCGG CTGTCGAGGA ACTCCTTGGG CTGCTCCCTT CTGAGGCCAC GCTATGA
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| Protein sequence | MILQDGALYD PALDRFFRDL PLNGVRSRHS LRAYGYDVLV WARFLSEACA KTIWQADRHD
VLAYHRVRRR ADAGQRISAA SWNRAVACLD RLYRWGVQEG LIAEAPFTHR SVWRQGYAGR
RSQVAARNDA YEPAARRADV SFVTLEDYRR FRDVGLKALL PDGRTRPGAR DRNGIRNALF
ADLLVTTGLR LEEASSLFTS DLVFADQRPG RQVWLDLPDA QTKGDRGRQI LVPARLLEQV
RAYVDVERAH AITKFQQRSG WQSIDRPIFV HRERHAARLR LLDGGDIALD LLDPEERCRI
IVCDSDGTPS EPAALWLSEV GMPVQPNSWE VIFARASSRC RSFGLDINIS PHQLRHTFAV
HMLAMLIQHR IRDAALPAGS MEGYRQMLGD PLQQVQRLLG HASLTTTYIY LDHIATRADT
VDAAVEELLG LLPSEATL
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