Gene Xaut_4962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4962 
Symbol 
ID5420580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp180114 
End bp181460 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content72% 
IMG OID640873618 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001409398 
Protein GI154243825 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.480861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC CGCGGCGGTG GAGCCTGAGC CGGCGCCTCG GCCTGTGGCT CGCCTTGTCG 
GTCGCGGCTC TGTGGCTTGC CGCGGCCACC GTGGCGGGGC TGGTGCTGCG GCAAGAGATC
GACGAGGTGT TCGACAGCGC TCTGCAGGAG GTGGCCCAGA GGGTGCTGCC GCTCGCTTAT
TCTGAACTGC TCTCCCGCGA GGACGGCGCC GGCGCCCAAC ACATGGCGCC GGTTGGCCCG
CACCGGGAAT ACATTACCTA TGTGGTGCGC GATGCCGAAG GCCGCGTGCT GCTCCAATCC
AGCGATGCGG AGCAGATGGC GATCCCCGCG GGCCTCGCCC CCGGCTTTCA CACCACGGCG
CGCCTGCGCA CCTATACCGA AGCCGCGGTC CGGGGCACCA TCGTCGTCAC GGCAGCCGAG
GAGCTCAGCC ATCGCGCCGC CGCGGTGCAG CGGGCGGCGA TGGCACTGAT GTGGCCGCTC
GTGGCCCTGG TGCCCATCGC TCTCACCGGC GTCTGGCTCA CGCTCCGCCT CACCCTAAAG
CCGGTGCTCG CCTTTCGCTA TGCCATCGCG GAACGCGGGC GCGGCAACCT TGCGCCGGTG
CCAGAGCAGG GACTGCCCGA GGAGATGGCG CCGGTCGCCG GCGCGGTGAA CGCGCTGCTG
GAACGGCTGC GTGGCGCGCT AGAGGCGGAG CGCGGCTTTG CCGCCAACAG CGCCCATGAG
CTGCGCACGC CCATCGCGGC CGCCCTGGCC CAGACCCAGC GCCTCATGGC CGAGCTGCCC
GAGGGACCGG AGCAGGAGCG GGCGCGGACG ATTGCGGGCG CGCTGCGCCG CCTCTCCCGC
CTGTCCGAGA AGCTGCTGCA GCTCGCCAAG GCCGAAGGCG CCGGCCTCCT CGCCGAGGCG
CCGGCCCCGC TCGCGCCGGT ACTGCACCAT GTCATTGCGG ACCTCGATCG CCAGAGCGCC
CGCGCCGCCG GCATCGAAAT GACCATCGCG GCGGACGGCG GCCTCGTCAG CGATCTCGAC
CCCGACGCCT TCGCCGTGCT CGCGCGCAAC CTCATCGAGA ACGCGCTGAA ACACGGCACG
CCGGACACCC CCATTCATGT CTGCCTCGCC GCAGACCGGC TCGAAGTCTC CAACCACGGT
CCCGTGGTGC CCGCCGACCG CCTCGCCCTG CTGCTGCGCC CGTTCGAGCG AGGGCCGACC
GGGGCGGACG GCTCCGGCCT CGGGCTCGCC ATCGCCGCCG CCATCTGCCG CGGCGCGGGG
CTCACTCTGG AGATCGCCTC GCCGATCCCG GGCGGTGCGG ATGGCTTCAG CGCCGTGGTG
CGCTTTCCTG GGCAAGCGCG ATCCTGA
 
Protein sequence
MSGPRRWSLS RRLGLWLALS VAALWLAAAT VAGLVLRQEI DEVFDSALQE VAQRVLPLAY 
SELLSREDGA GAQHMAPVGP HREYITYVVR DAEGRVLLQS SDAEQMAIPA GLAPGFHTTA
RLRTYTEAAV RGTIVVTAAE ELSHRAAAVQ RAAMALMWPL VALVPIALTG VWLTLRLTLK
PVLAFRYAIA ERGRGNLAPV PEQGLPEEMA PVAGAVNALL ERLRGALEAE RGFAANSAHE
LRTPIAAALA QTQRLMAELP EGPEQERART IAGALRRLSR LSEKLLQLAK AEGAGLLAEA
PAPLAPVLHH VIADLDRQSA RAAGIEMTIA ADGGLVSDLD PDAFAVLARN LIENALKHGT
PDTPIHVCLA ADRLEVSNHG PVVPADRLAL LLRPFERGPT GADGSGLGLA IAAAICRGAG
LTLEIASPIP GGADGFSAVV RFPGQARS