Gene Xaut_4938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4938 
Symbol 
ID5420387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp162530 
End bp163033 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content59% 
IMG OID640873597 
Producthypothetical protein 
Protein accessionYP_001409377 
Protein GI154243804 
COG category[S] Function unknown 
COG ID[COG4916] Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGCTGG AAGCCCGGAT CGGGCCCAAC TCCTATTTCT ACGAGAACAA CTATGTCTCC 
CAGTTGGCAC GGCCGTCGCT CGACACGCTC CTACAGAACA TCTATCGTGA TTGCTTGAAG
CTCATCGTCG TCTTCATAGG CGTGGACTAT CAGAGGAAGG ACTGGTGCGG CATCGAGTTC
AGGGCGATTC GGGAGATCAT CATGGAACGC GACCATCTGC GCATTATGTT CTTCCGCACG
GATGAGGGCG CCGTTGAGGG CGTGTTCAAG ACCGACGGCT ATATCGACGC TCGACGCTTC
AGTCCCGCTC AGATCGCGGA TTTCGTAGGC CAGCGCCTCA AGCTGCTCGG CCAGCCGTGC
CTTCCTTCAA CTTCAATCCG GCGGCGACCG ATGCCGGTCC TTCCTCGGTT TGGTGGACAC
CCATGTCAGC TTTTGCGGGC TTCTGCCTCG AAGGGTGACT GGTGCAACAC TACCGCCGTC
GCTACCGCAT GGCCACGGGC ATGA
 
Protein sequence
MRLEARIGPN SYFYENNYVS QLARPSLDTL LQNIYRDCLK LIVVFIGVDY QRKDWCGIEF 
RAIREIIMER DHLRIMFFRT DEGAVEGVFK TDGYIDARRF SPAQIADFVG QRLKLLGQPC
LPSTSIRRRP MPVLPRFGGH PCQLLRASAS KGDWCNTTAV ATAWPRA