| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4926 |
|---|
| Symbol | |
|---|
| ID | 5420538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009717 |
|---|
| Strand | + |
|---|
| Start bp | 147137 |
|---|
| End bp | 148192 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640873586 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001409366 |
|---|
| Protein GI | 154243793 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGTGC TCATGCAAGC CCTGGCGGGC TGCGACCGCG CGGACTCCGT GGCGACGGCG
AAGCAGCCTA TTCTTGTTCG CGTCCAGACC GTGCAGATGG TCGACAGAAC GATCTCGATC
GTCCTGACCG GAGACGTGCA GGCCCGAACC CTTGCGCAAC TCTCCTTCCG CGTGACCGGG
CGGGTGACCG AACGTCTGGT GGACGTGGGC GCGCATGTTG AGGCCGGCGA CGTCCTGGCG
CGCCTCGCTC CCACGGAACA GCAGGCCGAT CTCGCCGCCG CTACCGCGGC GGTCGCAGCA
GCCGAATCCC GGCTCAAGGT CGCCACCGCC AATTTCGAGC GGCAGAAGAC GCTCCTCGCC
AAGGGCTTCA CCACGCGTGC GGCCTACGAT CAGGCGCAGG AAGCGTTGGG CGGCGCTAAG
AGCGCACTCG AGGTGGCCAA GGCGCAGCTC GGCACCGCCA AGGACGCGCT GACCTACACC
GAACTGCGGG CAAGCGCGGC CGGCGTCATC ACCGTCCGCA ATCTCGAAGC AGGACAGGTG
GCGCAGGCGG CGCTTTCGGT CTTCACGCTG GCGCAGGACG GGGACAGGGA CGCCGTGTTC
GATGTGCACG AGACATTCTT CCGGGAAGCG GAGAGCGACA GGATCGCGCT GGCCCTCGTC
TCCGATCCTG CGGTGACCGC GACGGGGCAC GTGCGGGAAA TCTCGCCGAC CGTGGATCCC
AAGACCGGCA CGGTGCACGT GAAGGTGGCC ATCGAGAACC CGCCTGCGGC GATGACCCTG
GGCAGCCCGG TCACCGGCAC CGCGACCTGG AAGCCGGAGC AACGGATCGT TCTGCCATGG
AGCGCGCTCG CTGCGGTGGG TGCCACGCCC GCCGTCTGGC GCCTGGACCG GGCCAGCAAG
ACGGTCTCCC TGAAGACGGT GACCGTCGAT GATTACGGAA CGGGGACGAT CGTGATCTCC
CATGGGCTCG CGCCCGGGGA TGTGGTCGTT GTCGAAGGCG GCAAGCTGCT GAGCCCCGGC
CAGATTGTTA CATATGACGC GGAGAGCCGG TCGTGA
|
|---|
| Protein sequence | MLVLMQALAG CDRADSVATA KQPILVRVQT VQMVDRTISI VLTGDVQART LAQLSFRVTG
RVTERLVDVG AHVEAGDVLA RLAPTEQQAD LAAATAAVAA AESRLKVATA NFERQKTLLA
KGFTTRAAYD QAQEALGGAK SALEVAKAQL GTAKDALTYT ELRASAAGVI TVRNLEAGQV
AQAALSVFTL AQDGDRDAVF DVHETFFREA ESDRIALALV SDPAVTATGH VREISPTVDP
KTGTVHVKVA IENPPAAMTL GSPVTGTATW KPEQRIVLPW SALAAVGATP AVWRLDRASK
TVSLKTVTVD DYGTGTIVIS HGLAPGDVVV VEGGKLLSPG QIVTYDAESR S
|
|---|
| |