| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4916 |
|---|
| Symbol | |
|---|
| ID | 5420393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009717 |
|---|
| Strand | - |
|---|
| Start bp | 137786 |
|---|
| End bp | 138856 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640873578 |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_001409358 |
|---|
| Protein GI | 154243785 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGA CCCGGAAGCT TCTGATTTTC GCAACCCTCG CCGTGATCAT GGCCGGCGGA
GGGTATTGGG GGTGGCAGAC GTTTTTCAAC AAGAGTCTGC CTGACGGCAT CGCCAGCGGA
AACGGGCGCA TCGAGGCGAC CGAGATCGAT GTGTCCACCA AGATCCCAGG CCGCATCAGG
GACATCCTTG TGGATGAAGG CGACTTCGTC GAGGCCGGCC AGATGCTTGC CCGCATGGAC
ACGGAGCAGC TCGAAGCTCA GCGCCGACAG GCACAGGCTC AGCTCCAGCG GGCCCTGATC
GGCATCGACA CCGCCAAGAG CCTCGTCACC CAGCGCGAGG CCGAACGCCG CGCCGCGATC
GCCACCATCG CCCAGCGCAA CGCCGAGCTC GACGCTGCGG ACCGCAAGCT CGCGCGATCG
AGCCAGCTCG TGAAGACCAA TGCTGTGTCC CAGCAGGTGT TCGACGACGA CCGGGCGAGC
GCCGAGGGCG CCAAGGCCGC CGTGGCCGCC GCCGAGGCCC AGCTCGCCGC CAGCGAGGCC
GGGATCAGCA CCGCGAAGGC GCTCATTGTC GACGCCGAAG CGGCAGTGGA CGCGGCGCGC
GCGGCCATCG ACAGCATCAC CGCCGACATC AATGACGGCG TGCTGAGGTC CCCCCGCGCT
GGACGCGTCC AGTATCGTGT CGCCCAGCCC GGTGAGGTCT TGTCCGCGGG CGGGCGGGTG
CTCAATCTCG TGGATCTCGG CGACGTGCAC ATGACCTTCT TCCTCCCCAC CGTCCAGGCC
GGGCGGGTCG CCCTTGGCGC GGAGGTCCGG CTCGTGCTCG ATGCGGCGCC GCAATACGTC
ATTCCGGCCA AGGTCACCTT CGTGGCGGAC GTTGCCCAGT TCACGCCCAA GACGGTGGAG
ACGGAGGAGG AGCGCCTCAA GCTCATGTTC CGGATCAAGG CGCAGATCCC GCCGGAGCTG
CTGACGAAAT ACATCCAGCA GGTCAAGACC GGCCTGCCCG GCATGGCCTA TGTGCGGCTT
GATCCGAACG TGGAGTGGCC GGCCCGTCTC CAGCAGGGCC TCCTGCAATG A
|
|---|
| Protein sequence | MTSTRKLLIF ATLAVIMAGG GYWGWQTFFN KSLPDGIASG NGRIEATEID VSTKIPGRIR
DILVDEGDFV EAGQMLARMD TEQLEAQRRQ AQAQLQRALI GIDTAKSLVT QREAERRAAI
ATIAQRNAEL DAADRKLARS SQLVKTNAVS QQVFDDDRAS AEGAKAAVAA AEAQLAASEA
GISTAKALIV DAEAAVDAAR AAIDSITADI NDGVLRSPRA GRVQYRVAQP GEVLSAGGRV
LNLVDLGDVH MTFFLPTVQA GRVALGAEVR LVLDAAPQYV IPAKVTFVAD VAQFTPKTVE
TEEERLKLMF RIKAQIPPEL LTKYIQQVKT GLPGMAYVRL DPNVEWPARL QQGLLQ
|
|---|
| |