Gene Xaut_4848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4848 
Symbol 
ID5420506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp64932 
End bp66152 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content62% 
IMG OID640873516 
Productmajor facilitator transporter 
Protein accessionYP_001409296 
Protein GI154243723 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.869631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.114324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCAT TGCTGTTGGC AATGTTTACG ATTTCCGTTG GCTATGGGTT CCTTCTGCCG 
ATACTTCCGC TTGCGATTGA ACGGATCGCA GGAACGGCGG AACCTACTAT CCTATCGCGG
CATACCGGCA TGCTGACCGG AACCTACACC CTCGCGCTGT TTTTGTTCGC ACCACTATGG
GGCCGCCTTG CCGATCGGCA TGGTAGCCGC CCCGTGCTGC TCGCGGGACT GATGGGGTTC
TCCTTGACGC TGGCACTGTT TGCGCTCGCC AATGGCGTCC CGCTGCTCTA TCTCGGCCGC
TTCCTGAACG GGTTGTTCGC AGCTTCCATT GTGCCCGCAG CCTATGCCCT AGTCGGCGAC
TATGCTCGCA CGAAGGAATG GCGCGCCCGC CGCTTTGCTC TGCTCAACAT TGCCGGTGCC
ATTGGCTTCC TAGTCGGGCC GATGCTGGGA AGCTTCACCG TCGTCGTCGC CCGAGGACTC
TTCCCAAGTT CAGGCGAGGA CGCAGTTTCT CTTTCACCCT ATGTAGCCAC ATCAGGTTTT
TCGTTCCTGG TGGCGCTGGC AGTATGGTTC TTCGTGCCTG ACGCCATGGA GCGCGGCATA
AATCAGGAAG GAGTTGCAAG CGGACCCGAG GGCCGCGCCG CCCTGCCACG CCTCCTTGTC
ATTTCGTTCG TAACCGCCGC GGCTGTGGGC GCCTTCGAAG TTGGCCTCTC GCTTCGCGGA
TTGCAAGTTC TCGACATGAG TACCTATCAG ATCGGGCTCA TGTTCAGTGT GTGCAGCCTC
GTCATGTTGG TCGCCCAAAT GATCGTCTTC TCACCGTTCG TGAAGCCGGA GACCACGCGC
TGGTTCCTCA TGCCCGCTCT CGCTGTCTTG GCAGCGAGTG TCGCGGCCGT GCCGTTTGCC
TCAGCGACCA CGTCCACTGT GTTCGTCGTA GCCGCGATCG CGGCCAGCGC TGGTATCCTC
TCCCCCATTG CGACGTACTG GATTTCGCTC AGTGCCGGGG AAAGGCAAGG AGCGGCATTG
GGTCGCCAGA CTGCGGCTGC GAGTCTTGGC CAAGCCGCCG GATCGGCCGC CGGCGGTCTG
CTGTTTGGCG TTTCCTTCGT GCCGAACGCG CCTTTCACGC TCGCGGCCCT CGCTGTGCTG
GGAGGCTTCG TCGCAAGTCT GGGTATCCCG GGCCTGCTGG CACGGGTGAA CGGTCTCGCC
GCTCTTGAAG CGGCGCGCTG A
 
Protein sequence
MFSLLLAMFT ISVGYGFLLP ILPLAIERIA GTAEPTILSR HTGMLTGTYT LALFLFAPLW 
GRLADRHGSR PVLLAGLMGF SLTLALFALA NGVPLLYLGR FLNGLFAASI VPAAYALVGD
YARTKEWRAR RFALLNIAGA IGFLVGPMLG SFTVVVARGL FPSSGEDAVS LSPYVATSGF
SFLVALAVWF FVPDAMERGI NQEGVASGPE GRAALPRLLV ISFVTAAAVG AFEVGLSLRG
LQVLDMSTYQ IGLMFSVCSL VMLVAQMIVF SPFVKPETTR WFLMPALAVL AASVAAVPFA
SATTSTVFVV AAIAASAGIL SPIATYWISL SAGERQGAAL GRQTAAASLG QAAGSAAGGL
LFGVSFVPNA PFTLAALAVL GGFVASLGIP GLLARVNGLA ALEAAR