Gene Xaut_4844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4844 
Symbol 
ID5420518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp56937 
End bp58064 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content57% 
IMG OID640873512 
ProductABC-2 type transporter 
Protein accessionYP_001409292 
Protein GI154243719 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0699099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAAT GGGTCATCAA CGTATTTTAT TTGGGTCTCA AAGAGATTGC GAGCCTCTTG 
CGCGACATCG TGATGGTCGG GCTGATCATT TACGTCTTTA CGGTTGCTGT TTACACCATG
GCGACCGGTC TCAAGACCGA AGTAAATAAT GCCAGCGTGG CTGTCGTCGA TGCCGACCGC
TCAACACTGT CATCACGCAT CAAGGACGCT CTTCAGCCAC CTTATTTCAG CGTGCCGCGT
GACATCGACC GTTCGGAGGT CGACGAACTC TTGGACAAAG GGTCATATAC ATTTGTCCTG
GAGATACCGC CCAGCCTCGA AGCGGACCTC CTCGCAAATC GTGGTCCTTC GATCCAAATC
AACGTCGACG CGACGGCCGT GAGCCAAGCC GCCGTGGGAA CAGCCTATAT CCAGGAAATC
ATCTCCCGCG AGGCGGCAGA CTTCCTGCAC CATCACGGTG CGAACGAAGT CGTTCCGATC
GAGCCCGTCA TCCGCGCCTT GTTCAACCAG AACCTCGAGG CGATCCGCTT CAACGCGAGC
ATGGACATCA TCATGAACGT AACGATGCTC GGGATCGTTC TCGTCGGGGC GGCCGTCATG
CGCGAACGAG AGCACGGCAC CATCGAACAT TTACTGGTGA TGCCGGTTCG GCCAAGCGAA
ATTGCCGCAG CGAAGATCTG GGCAAACGGT CTGATCATCC TACTGGCTGC CGGTCTTTCC
TTGCATGTTG TCATACAGTT CGTGCTCCAG ATACCCATCA TCGGCTCCGT CGAGCTTTTC
CTCGCTGGAA CCGCGATCTA TCTCTTCGCG GTGACGTCGC TCGGTATTTT GCTGGCGACG
ATCGCTAACT CGATGCCGCA GTTCGCGCTG CTGGCGATCC CGGTGTTCAT CGTCATGTTC
CTGCTGTCGG GCACATTCAC GCCGTTTGAG AGCATGCCTC CGGTTCTACA GGACATCATG
TATGCGGTGC CCTCGACGCA CTTTGTGAGA TTTGCGCAGT CGATCCTGTA TCGAGGCGCC
GGGCTCGACG ACGTCTGGAT GGATTTGATG GTCATGATCG CCTTGGGCGC AGTGTTTCTC
GCGACGGCTC TATCGCGATT CAGGTCGATG CTCGTGCGGC AGTCATGA
 
Protein sequence
MRQWVINVFY LGLKEIASLL RDIVMVGLII YVFTVAVYTM ATGLKTEVNN ASVAVVDADR 
STLSSRIKDA LQPPYFSVPR DIDRSEVDEL LDKGSYTFVL EIPPSLEADL LANRGPSIQI
NVDATAVSQA AVGTAYIQEI ISREAADFLH HHGANEVVPI EPVIRALFNQ NLEAIRFNAS
MDIIMNVTML GIVLVGAAVM REREHGTIEH LLVMPVRPSE IAAAKIWANG LIILLAAGLS
LHVVIQFVLQ IPIIGSVELF LAGTAIYLFA VTSLGILLAT IANSMPQFAL LAIPVFIVMF
LLSGTFTPFE SMPPVLQDIM YAVPSTHFVR FAQSILYRGA GLDDVWMDLM VMIALGAVFL
ATALSRFRSM LVRQS