Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1811 |
Symbol | |
ID | 5407080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 314307 |
End bp | 315299 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640871765 |
Product | diaminopimelate epimerase (DAP epimerase) |
Protein accession | YP_001407601 |
Protein GI | 154175321 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACTCTTG GCGTGCAGTA TCGTCATGAA AAGATCGACT ACAAACAAAA GTCAAAAAGC CTCGTTGATG ACAATAGTCT ATCGCGCTGG GATTTTTCCG TGTTTGGCGA GGATGAATTT TACGTCACTG ACGCACTAAC CTTGCTAGCA GGACTAAGAT ACAATCACGA CAAAGACTAC GGCGGGCACG TTGCGCCGCG CGGGTATGTC GTCTATCATA TAAATGATAA CTTCTCGCTC AAAGGCGGCG TTTCAGCCGG ATACTCTACG CCAAATATCG ACGATAGAGC CGATGGCATA ACGATACCGA TCAATCAAGG ACGCGGTATA AGGCTGGGCA GGAGTAGCTT AAAGCCAGAA AGTAGCGTGA ATTACGAAGC AGGATTTTCA TTTGACAACA ATCAAAATTT AAAATTTTCG GCGATGGCGT TTCATACCGA CTTTAAAGAC AAGATCGACG ACGCCGTATT GTGCGGTGGC TGGGGAAGTG GGGCGAATTT CTTTAATCCC TCTACTTGGA CTTGCACCTA CAAAGGCAAG ACCTATTTTT CTATCTATGA AAAGGTAAAT GTCGGCAAAT CCGAGATAAA CGGCGTCGAG CTCACCGCAG ACTGGGACAT CCTCTCAAAT TTAGCCCTTC ACACCAACTA CACCTATACA CAGTCAAAGC AAAAAAGTGG CTCCAACGAG GGTAAATCTC TAAACGATCT GCCACGTCAT ATGCTAAAAA CAGGGCTTGA TTACGACTTT AATAAAGAGC TAAATTTCTG GGCGCAGGTC GATTACATAG GCAAGATCAA AAACGGCGTA AATTTAAGCA CGAATTCTTA CACATTGACC GATATCGGGG TGAATTATAA AATCACCAAA AACGCGAGTA TAAATTTTAG CGTCTATAAT CTTTTCGATA AAAAACTCAT AGATCAAAAG CCGGTCAAAG CGATCGTGAC GGACGGACGC AAATTCCAGC TTGGCTTTAA CGTAAATTTC TAA
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Protein sequence | MTLGVQYRHE KIDYKQKSKS LVDDNSLSRW DFSVFGEDEF YVTDALTLLA GLRYNHDKDY GGHVAPRGYV VYHINDNFSL KGGVSAGYST PNIDDRADGI TIPINQGRGI RLGRSSLKPE SSVNYEAGFS FDNNQNLKFS AMAFHTDFKD KIDDAVLCGG WGSGANFFNP STWTCTYKGK TYFSIYEKVN VGKSEINGVE LTADWDILSN LALHTNYTYT QSKQKSGSNE GKSLNDLPRH MLKTGLDYDF NKELNFWAQV DYIGKIKNGV NLSTNSYTLT DIGVNYKITK NASINFSVYN LFDKKLIDQK PVKAIVTDGR KFQLGFNVNF
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