| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1782 |
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| Symbol | |
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| ID | 5407643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | - |
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| Start bp | 1652114 |
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| End bp | 1656193 |
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| Gene Length | 4080 bp |
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| Protein Length | 1359 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640873112 |
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| Product | putative diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor |
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| Protein accession | YP_001408902 |
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| Protein GI | 154174790 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACAAA ATAAAAAAAG CAGACCTAGC TCTTGGATAA TCAAAAATTT TCACGCTAAA
AATTTACTCG CTTTACTCGC CTTTTTAGCC CTTGCATCGT TTATATATAG TGCTGCAAAA
AGCGACGTCA GATACGAGGT GAGCACTCTA AATTCAAACA TCCAAAGCTC TATCAGGCGA
AATTTAGACA TCATCCAAAA CGACCTTTAC GTAAGGGCTC AAAAGATAGA TAGCGGCCTT
TTGAGCGAAG AAGCAGCCAT GAGCGATGAT AGCTTGAGCG AGCTATATAA TGCCGTTTAT
ATCGTAGACG CGAACTCTAC TCTGCGCTAC TCGCGCGAAT TTACAGGCGC TCACGAGCTT
AAAAATTTCG ATCTTCCTTG GCTCGATGTG CTTGCTAAAA GGCCTTTCGT GGTTTCTAGC
CGCGCGTATA AGGGCGGACG AGCCGAGGCG GTATATGCGG CTTTTAGGTT GAGCCAGGGC
AAAAGATTGA TCGTGGAGCT AAATTTAAAG CTTTTGAGCG TCAGCATAAG CAACGCCATC
AGCCAAAGCA GCGATATCGC CTTTTTGTGT GATAAAAACG GCAACCTCTT AAGCGATGAA
TTCAGCAGAT TTTTCAAGCG AAGCAAATAC ATAAAATATC TTAGCCTAGG AGATGAATTT
GGCGAGAGTA AGACGATATT TTCGCCAACG GATATGAGCC TTGAAGTGAT CGATTATATG
AAAGATTATG AAATTTTCGT CATCACCGGC TCTACTAAAA ATAATGAAAT TTTAGCTCAA
TGCCTGCTTT TGGCCGTATC GATATTTTGT TTCGCGGCTT TTGTGCTGCT TTGGATCAAG
GACACGGCAT TTACTAAAAA AAATATATCG GCTCCGCTGC AAGACATACT GGAGTTTTTA
AGGGATCGGA GCAAAAAGGC AGATGCTAAA TTTGCCGTAA GCGAGCTTGA GGAGATAAAC
AAGAGCGTAG AAGCGCTTTA TGAAAAGATA GACGAGGCGA ATTTAGCCCT TGAGAGCTAC
AAAAGCAGGT TTGGCTATGT GTTCGAGCAG GGCTCTTTAA ATATCCTGGT CTACGACGCA
TACACGGGCG ATATAGTCGA TGTCAGCAGC AACCTGCTAA AAGCGACCGG CTACACGCGC
GAACAGATGC TAAATTTAAA CATAAAAGAC CTCGTGTATT CTAGTTTTAG CGATATGGTC
TATTATAGAA GAGAGGCTAT CGAAAAGGGC AAGCCTTTTA AGCTAAAAGC CGTGTTCAAA
AACGGACAGA TAAGAGACAT AAGCGTTATG GACTCACCTA TAGAGCTAAA GGGACAAAGG
CTAAATTTCG TCGTTGCCAA AGACATCACT GACGAGCAAA ACGCGAGCAG GAACGACGAG
ATCATCAAAA ACTATATGTT CGTCTCTCCT AGCGTCATTA TGATCGCCCA AAAAGACGAG
CCTTTCATCA TCACTCAAAG CACAAATAAC GCAAATTTGG TATTTGGCAT AAAAGATGAC
GCACCTATCG ATCTAAGAGC GCTTGTTTGT GGCGAGAATC TCAATGAATT TATAAATGCC
ATAGAGGTCG CCAAAAAGCT CTTCGTGATG GGAGATGGTA GCAAAGAGAC GCTTGATTTC
ATCGTAAAAA TGACCGGCAG AGGCGGCCAA AAGACGCCTT TTAAGGTTTA TGTGAAATTT
ATCCTAAACG AGGAGAACGA ATTTGACAAG ATCGTCTATT CTTTTAGCGA TCTAAGCGAT
CTTGCGAGGC TTCAAGAAAG ATACGACGCC GATCAAAAAA GCTTTAAAAA CATACTCTGG
GCGAGCGAAG CAGTCGTCTT TTCATGGAGT AAAACAAGCG GTGTCATGCA GGTAGACGAT
GGATTTGCAA AGATGCTGGG CTTTAACGAC GCGAACGAGC TTGGAGTGCT TGATTTCAAG
CGTTTTAAGG CCTTGCTGGC AGGTAGCTAC GCGAGTTTCG AGCAGCTTTT TGAAGGCATG
AGGTTTGATG AGAGCGTCTA TTTTGGCGAG TTGAAATTTC ACGCTAAGGA TAAAAGCGCA
GTTTATATCG GCGTGAGGGC GCGGGCTTTA GAATTTGACG AAAACGGCGA AGCGTGTCTC
ATCAAAGGCG CGTTTAAAAA TTTGACCCAG CAAAATCAAG CCATCATCTA TCAAGATCTG
CTTTGTAAGC TGTTTTCTTA CGCCAAAGAG GGCGTGGCTA CTTTAAGCGC CGATCTTAAG
ATCATAGACG CGAACGACGC GTTTTGTCAG ATGTGCGGCT ACGAGCGAGA TGAAATTTTA
GCCAAAGACG TAGCTTTCAT AAAGCCCGGT CTAAGCGGCC TCACGCAGGA TATGACGAAG
GCGGCCAAAG GCGGCTTTTG GCAGAGTAAA ATTTTAAATA AAAACAAAAA CGGCGAGAAT
AGATTCGAGC TGGCGCGCCT AGCACCGCTA AATGACGTGC AAGGAGGGCT TTTTTGCTAC
GTTTTGCTGG TCTCAAATAT AAACGATATC GAGTCAAATC AAGACTACCT CGAATACATC
GCCTATCACG ATCCGCTCAC CAGACTGCCA AATAGAATTT TATTCACGCG CAAGCTTGAA
GATATGCTGG CTAAAAACGA TAGGCATATC GCGATCGCCT ATCTTGATAT GGACGGATTT
AAGGGTATAA ACGACACATA CGGTCATCAG GCCGGAGATA AATTTTTGAC TGAAATTTCA
AGCGGCATCG ATAGGCTCTT TGACGAGAGA GATATGTTTG CGCGTATCGG TGGAGACGAG
TTTGTGGCCA TCATCGTCTA TAAAAACGCG GGCGAAGTTT ATGAGATCGT GCAAAATATG
CTACGCATCG CCTCAAGCGA GGTCTGGTAT GAAAACGTGA AGCTTCAAAT CAGTGCGAGC
ATAGGCGTCA GTATGGCGAG CTTAGCGCAA ACAAGTGCCG AAAATCTGCT CGAGCAGGCA
GACTGGGCGA TGTATCAAGC AAAGCTTGGT GGAAAAAACA GATACTATGT GTTTGACGCG
AGCAAAGACA GGAATTTCAA AAACCAATAT GAAGAGGCCT CAAAGATACT AAAAGCGCTT
AGAGATGATG AAATTTTCCT CGAATATCAG CCCGAGATCG ACATCAAAAC GGGCAAAATT
TTAAGCTACG AGGCGCTTAT CAGGTGGCAA AGCGAGGGGC GCGTCATCTA TCCGGACGAT
TTTTTGCCAC TTGTCAAAAA GCAATACATC ATCGACGATA TCGCGCTTTT TTCTATCAAA
AAGGCGCTTG AAGCGCAAAT TTTATGGAGC AAAAACGGCA AAGATGCCAA AGCTTGCGTG
AATTTAAACA TCGAGCAGCT TTGTTCGGAT GAATTTTTCG CGAAATTTAA AGAGCTGGCA
AATGCCAATA AAAGGCTAAA TTTTGGCGAG CTCGTCATCG ATATAGTCGA TGCTAACGCT
GTAAAAGACC TGCAGCCGGC TCAAAAGGCG CTACAAAGAT ACAAACGCTT TGGCGTGCGC
TTCGTGCTTG ATGACTTTGC GTCGCATTCA AGCTCTTTTG AGGCTCTTGG TGTGCTTAAA
GTCGAGCGTT TTAAGGTCGA TAAACAGCTC TCGCGTCAGG CCTTTGACTC TAAAGCCTCG
ATAATGACGC TACGCATGAT AAAGCAGATC TCGGATGTTT TTGGACTTAA GGCGACGATC
AAGAACATCG AGGATAAAAA GACGCTTGAA ATTTTATGCG GATTTGGGTT TGAGTGCTTT
CAGGGTAACT TTTTCACAAA GCCACTTAGA CTGGACGAGG CGCTAAGGTA TGAATTTAAG
GGCATCAGCG GGCTAGATCT AAAGCGTCAT ATCGATGATG CGCAGTTTGA GCGACTAAAA
GAGTGCGTAG AGCTAAAAGA GTGCGCTCTT GAGATCGTCT CGTGGCTGCA AAACGAGGAA
AATTTAAACG AGGACATAAA AGACGAGATA GCCAAAAAGA TACGAAGTCA AAATCCATAC
GAGCAAATTT GCACTTTGTT AAAGCGGGCT TTAAGCGCTC AAAACAAAGA CGAGGCGCTT
AGGCTAGCAA ACGAAGCAAA CGCGATGTGT GATGAAATTT TAAAGGATAT GAATGAGTGA
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| Protein sequence | MLQNKKSRPS SWIIKNFHAK NLLALLAFLA LASFIYSAAK SDVRYEVSTL NSNIQSSIRR
NLDIIQNDLY VRAQKIDSGL LSEEAAMSDD SLSELYNAVY IVDANSTLRY SREFTGAHEL
KNFDLPWLDV LAKRPFVVSS RAYKGGRAEA VYAAFRLSQG KRLIVELNLK LLSVSISNAI
SQSSDIAFLC DKNGNLLSDE FSRFFKRSKY IKYLSLGDEF GESKTIFSPT DMSLEVIDYM
KDYEIFVITG STKNNEILAQ CLLLAVSIFC FAAFVLLWIK DTAFTKKNIS APLQDILEFL
RDRSKKADAK FAVSELEEIN KSVEALYEKI DEANLALESY KSRFGYVFEQ GSLNILVYDA
YTGDIVDVSS NLLKATGYTR EQMLNLNIKD LVYSSFSDMV YYRREAIEKG KPFKLKAVFK
NGQIRDISVM DSPIELKGQR LNFVVAKDIT DEQNASRNDE IIKNYMFVSP SVIMIAQKDE
PFIITQSTNN ANLVFGIKDD APIDLRALVC GENLNEFINA IEVAKKLFVM GDGSKETLDF
IVKMTGRGGQ KTPFKVYVKF ILNEENEFDK IVYSFSDLSD LARLQERYDA DQKSFKNILW
ASEAVVFSWS KTSGVMQVDD GFAKMLGFND ANELGVLDFK RFKALLAGSY ASFEQLFEGM
RFDESVYFGE LKFHAKDKSA VYIGVRARAL EFDENGEACL IKGAFKNLTQ QNQAIIYQDL
LCKLFSYAKE GVATLSADLK IIDANDAFCQ MCGYERDEIL AKDVAFIKPG LSGLTQDMTK
AAKGGFWQSK ILNKNKNGEN RFELARLAPL NDVQGGLFCY VLLVSNINDI ESNQDYLEYI
AYHDPLTRLP NRILFTRKLE DMLAKNDRHI AIAYLDMDGF KGINDTYGHQ AGDKFLTEIS
SGIDRLFDER DMFARIGGDE FVAIIVYKNA GEVYEIVQNM LRIASSEVWY ENVKLQISAS
IGVSMASLAQ TSAENLLEQA DWAMYQAKLG GKNRYYVFDA SKDRNFKNQY EEASKILKAL
RDDEIFLEYQ PEIDIKTGKI LSYEALIRWQ SEGRVIYPDD FLPLVKKQYI IDDIALFSIK
KALEAQILWS KNGKDAKACV NLNIEQLCSD EFFAKFKELA NANKRLNFGE LVIDIVDANA
VKDLQPAQKA LQRYKRFGVR FVLDDFASHS SSFEALGVLK VERFKVDKQL SRQAFDSKAS
IMTLRMIKQI SDVFGLKATI KNIEDKKTLE ILCGFGFECF QGNFFTKPLR LDEALRYEFK
GISGLDLKRH IDDAQFERLK ECVELKECAL EIVSWLQNEE NLNEDIKDEI AKKIRSQNPY
EQICTLLKRA LSAQNKDEAL RLANEANAMC DEILKDMNE
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