Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1770 |
Symbol | nifS |
ID | 5405921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 191729 |
End bp | 192919 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640871650 |
Product | NifS family cysteine desulfurase |
Protein accession | YP_001407486 |
Protein GI | 154173772 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS [TIGR03403] cysteine desulfurase, NifS family, epsilon proteobacteria type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.406981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGAGTAT ATTTAGATAA TAACGCCACG ACGATGGTCG ATCCTGAAGC ATTCGAGCTG ATGAAACCAT TTTTTTGCGA AAAATATGGC AATCCAAATT CCTTACATAA ATTTGGCTCA GAGACGCACC CGGCGCTAAG GACTGCGCTC GATCAGCTGT ATGCGGGCAT AAATGCCAAA GATAGCGACG ATATCGTGGT CACCTCGTGC GCCACAGAGA GCAACAACTG GGTCGTGAAA GGGGTTTATT TCGACAAGAT CGCCACAGGC GAAAAAAAAC GCATCATAAC AAGTGCCGTG GAGCACCCGG CTATCGCTGC AACGTGTCAA TTTTTAAAAA AATTTGGCGT TGAGCTTACG ATACTTGATG TAAACAGCGA AGGCGTCGTG ACTGCGCAGC AACTAAGAGA TGTGATGAGC GATGATGTCG CACTAGTCTC CGTGATGGTC GCAAACAATG AAACGGGCAT GATATTTCCG ACAAAGGAGC TAGCGGCAAT AGCGCATGAA TACGGAGCAC TTTTTCACAG CGACGGTGTG CAAGCCGTAG GCAAAATCCC TATAAACGTG CAAGATCTTG GCGTTGATTT TCTAAGCTTT TCGGCGCATA AATTTCACGG GCCAAAGGGC GTGGGTGGAC TTTACATAAA AGACAGTCAG CCCCTAAGTA GTCTGCTTCA CGGCGGCGAG CACATGGGCG GGCGCAGGAG CGGCACGCTC GATGTCGCAG GTATCGTCGG CATGGGCAAG GCGCTTGAGC TCGCCAACAA ATACATGAGC TTTGAGGGCT CACACGTGCG ACGCCTGCGA GATAAGCTGG AGGATGCGCT TTTATCGATA CCTGATGTCA GCGTAGTAGG CAAACGCGAA CATCGCGTGC CAAATACGAT CCTGGCGTCC ATAAAAGGCG TCGAGGGCGA GGCTATGCTG TGGGATCTAA ATCGTGCCGG TATAGCGGCA TCTACGGGCT CTGCATGTGC CAGCGAAACG CTCGAGAGCA ATCCGATAAT GGAAGCCATA GGAGCGGACA AAGAGCTCGC TCATACCGCG CTTAGGCTAT CTCTTTCGCG CTTTAATACA GAAGCCGAGA TAGACTACGC GATAGAGCAT ATCAAAAAGG CGATAACCAG GCTAAGAGCG ATATCAAGCA CATTTGCATA CGCACCGGTA GGTCACGTAA GCGGCCTATA A
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Protein sequence | MRVYLDNNAT TMVDPEAFEL MKPFFCEKYG NPNSLHKFGS ETHPALRTAL DQLYAGINAK DSDDIVVTSC ATESNNWVVK GVYFDKIATG EKKRIITSAV EHPAIAATCQ FLKKFGVELT ILDVNSEGVV TAQQLRDVMS DDVALVSVMV ANNETGMIFP TKELAAIAHE YGALFHSDGV QAVGKIPINV QDLGVDFLSF SAHKFHGPKG VGGLYIKDSQ PLSSLLHGGE HMGGRRSGTL DVAGIVGMGK ALELANKYMS FEGSHVRRLR DKLEDALLSI PDVSVVGKRE HRVPNTILAS IKGVEGEAML WDLNRAGIAA STGSACASET LESNPIMEAI GADKELAHTA LRLSLSRFNT EAEIDYAIEH IKKAITRLRA ISSTFAYAPV GHVSGL
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