| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1721 |
|---|
| Symbol | |
|---|
| ID | 5407338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 1569907 |
|---|
| End bp | 1571583 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640873036 |
|---|
| Product | FUR family transcriptional regulator |
|---|
| Protein accession | YP_001408826 |
|---|
| Protein GI | 154175506 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTT TGACAAGTCT GAGTGAAAGC ACACAATTTG TGTTGCAGCT GATTGTAGTG
CTTGGTTGTT TGTTCTACGG AGCAAAAAAG GGCGGTATGG CGCTTGGTAT TCTTGGGGGT
ATAGGACTTG TTATTCTTGT ATTTGCTTTT AGAATGCAGC CTGGCAAGCC TGCTGTCGAT
GTTATCTTGA CTATTTTGGC TGTTGTTGTT GCAAGTGCGA CATTGCAGGC TACGGGCGGA
CTTGATGTTA TGCTTCAGAT GGCGGAAAAG GCCCTTAGAA AGCATCCAAA ATTCGTTTGT
TATCTAGCCC CTATTTGCGG TTGGACATTG ACCGTTTTAT GTGGCACTGG ACATACTGTA
TATACGTTGC TTCCGATTAT TTATGACGTA TCTATAAAAA GTGGCATCCG CCCAGAGCGT
CCGTTGGCTG CCACCACTGT ATCGTCACAA CTTGCTATTA TAGCTAGTCC AGTTTCGGTT
GCGGGCGTTT CTATGGTCGC GGTCTTGCTT GGCACTGGAA CTAGCATAGA AGGATTTTCT
AGCTATCTTG ACCTTTTAAA AGTTACCATA CCTTCGACGT TTCTTGGTAT GCTCGCTATT
GGTACGTATT CTATTTTTAG AGGAAAAGAC TTGGATAAAG ATCCTGAATT TCAAGCAAAG
ATCGCAGATC CCGAGCAAAA AAAATATATT TACGGCTCCG AGGGTGTTAA ATCTTTCATT
GGCGTAAAAC TACCGAGAGT TCAGTGGAAT GCAATGTGGA TATTTTTAGC TGCTATCGCT
CTTGTGGCGG TTTTGGGCTA TTATAAACAG CTTCGTCCTT CTTGGACCTC TAATGTCCCG
GGAAAATCGA TCGAAATTCT AGTTGATAAA AAAGCCGTAA AAACCATCAA TGTCAAAGAC
GGCCAAGTCG TAGCCATGGT CGATAACAGT CAAATTTCGC AAGATGTAAA AGACAACAAA
GTCAAAAATA ATACTAAATT TAATAGTGTC GAAATTTACG GCAAAGATAA AAAGCTAACT
CAAAGTGTCG TATCGCAAGA TGGAAATGTA GTCATAACGA CCGGTGATAA GAGTGAAACT
ATAAATTCAG CCGTTATATC TGTAAAAGAT ACATTTAAGA AGACTTCGCC TTTAGATATG
GTTAGCACTA TTCAAATTTT TATGCTGCTA GCGGCTGCGA TAATGATGAT CTACTCTGGC
ATCAAATCTG CCAAGATCGC TCAAAATGAA ATTTTTCATA GTGGTATGGT GGCGCTTGTT
GCGATTTATG GAATTTCATG GATGGCTGAT ACTATGTTCC ATGCGCATAT CGAGATGCTC
AAAAATTCTC TTGGTGCGGT AATGGTAGCG TATCCTTGGA CTTATATCAT TGTCGGTATG
TTGATTTCTA AATTTTTGAA CTCTCAAGCC GCTGCCGCTG CTACTTTTGT GCCGCTTGCC
GTTCAAATAG GTGTGGATCC TGGCATCATC ATAGCATTTG CCACTGCGTG CTACGGATAC
TTTATCTTGC CTACATATCC AAGCGACCTT GCCGCTATCC AGTTTGACCG CTCTGGCACG
ACGCATATCG GCAAATACGT TATCAACCAC AGCTTTATCA TTCCTGGATT TATCGGAGTA
TTTTCATCAT GCTTCTTTGG CTGGATACTT GCGAGTGCTT ACGGATTTGT CAATTAA
|
|---|
| Protein sequence | MDFLTSLSES TQFVLQLIVV LGCLFYGAKK GGMALGILGG IGLVILVFAF RMQPGKPAVD
VILTILAVVV ASATLQATGG LDVMLQMAEK ALRKHPKFVC YLAPICGWTL TVLCGTGHTV
YTLLPIIYDV SIKSGIRPER PLAATTVSSQ LAIIASPVSV AGVSMVAVLL GTGTSIEGFS
SYLDLLKVTI PSTFLGMLAI GTYSIFRGKD LDKDPEFQAK IADPEQKKYI YGSEGVKSFI
GVKLPRVQWN AMWIFLAAIA LVAVLGYYKQ LRPSWTSNVP GKSIEILVDK KAVKTINVKD
GQVVAMVDNS QISQDVKDNK VKNNTKFNSV EIYGKDKKLT QSVVSQDGNV VITTGDKSET
INSAVISVKD TFKKTSPLDM VSTIQIFMLL AAAIMMIYSG IKSAKIAQNE IFHSGMVALV
AIYGISWMAD TMFHAHIEML KNSLGAVMVA YPWTYIIVGM LISKFLNSQA AAAATFVPLA
VQIGVDPGII IAFATACYGY FILPTYPSDL AAIQFDRSGT THIGKYVINH SFIIPGFIGV
FSSCFFGWIL ASAYGFVN
|
|---|
| |