| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1686 |
|---|
| Symbol | trpB |
|---|
| ID | 5407783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 1605071 |
|---|
| End bp | 1606435 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640873069 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001408859 |
|---|
| Protein GI | 154174899 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.815496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTGCA AGCAGTGCAA TATCGTGCTG TGCGTAGTCA AATCTTATGA AACGACGCTA
TCGCCGCCGA TTTTGAGGGA AGCGATAGCT GACCGCCAAA ATCGTGCTAT ATGTTCGGCG
CCTTGCGGAG CAAATAAGAT TTGCGAAACA TTTAAAAGGC ACAAATTTAA AAAGGACAAA
AAAGTGAATA AAAAAGCATA TTTTGGAAAA TTTGGCGGGC AGTTCGTGCC CGAGACCGTT
ATGTTTGCGC TAAACGAGCT GGAAGAGGCG TATGAAAAGA TCGCCAAAAC GAGCGAGTTT
GAGGCCGAGC TGGACGATCT TTTAAGGCAT TATGTCGGTC GCCCAAGTCC GCTATATCAC
GCCAAACGCC TAAGTGCGCA CTACGGGCAT GAAATTTACT TAAAGCGCGA GGATCTAAAC
CACACGGGCG CACACAAGAT CAATAACGCG CTGGGGCAAG CCCTGCTAGC TCAAAAAATG
GGTAAAAAAA AGGTGCTGGC TGAGACCGGA GCGGGGCAGC ACGGCGTGGC GAGCGCGACT
GCGGCGGCAC TTTTGGGCTT AGAGTGCGAC GTGTATATGG GCGCGACCGA TGTGGCGCGT
CAGCAGCTAA ATGCGTTTAG GATGCAACTG CTTGGCGCAA ACGTCATTAG CATCGAAGAG
GGTCTAAAAA CGCTCAAAGA GGCGACCACG GCGGCGATTC AGGCGTGGGT GAATGAGATA
GAAAGCGCAT TTTACATCAT CGGCTCGGCG GTCGGCCCGC ACCCGTATCC AAAGATCGTG
CGCGACTTGC AAAGTGTCAT CGGGCGCGAG ACCAAAGAGC AGCTGGCTGA ATTTGGCGTA
AAGCCCGACT ATATCGTCGC CTGCGTGGGT GGTGGCAGTA ACGCGATAGG TATTTTCAGC
GCATTTTTGG ACGATACGGA CGTGCATTTG ATCGGCGTTG AGGCGGCGGG GCTGGGAGCG
GACACGCCAT ACCACGCAGC CACGCTCACA AAGGGGCGCG AGGGCATCAT CCACGGTATG
AAAACCATCG TCTTGCAGGA TAGCTACGGC ATGATCGCCC CCGTGCATAG TATCTCGGCG
GGGCTTGACT ACCCGGGTGT CGGTCCGGAG CACTCGCACC TGCATGACAT CAAAAGGGCG
CATTATGAGG GCGTGACGGA TGACGAATGT ATCGAGGCTT TGAAGCTCAC TAGCCGCTTA
GAGGGCATCA TCCCGGCGAT CGAGAGCTCG CACGCGCTGG CGTATCTAGC GAAACTCTGC
CCTACGCTAA GCGGCAAAAA AACGATCGTC GTAAATGTCT CCGGCAGAGG CGACAAGGAC
ATGAACACCG TGATGGGCTA CGAGAAAGGA AAAATTTATG GATAA
|
|---|
| Protein sequence | MFCKQCNIVL CVVKSYETTL SPPILREAIA DRQNRAICSA PCGANKICET FKRHKFKKDK
KVNKKAYFGK FGGQFVPETV MFALNELEEA YEKIAKTSEF EAELDDLLRH YVGRPSPLYH
AKRLSAHYGH EIYLKREDLN HTGAHKINNA LGQALLAQKM GKKKVLAETG AGQHGVASAT
AAALLGLECD VYMGATDVAR QQLNAFRMQL LGANVISIEE GLKTLKEATT AAIQAWVNEI
ESAFYIIGSA VGPHPYPKIV RDLQSVIGRE TKEQLAEFGV KPDYIVACVG GGSNAIGIFS
AFLDDTDVHL IGVEAAGLGA DTPYHAATLT KGREGIIHGM KTIVLQDSYG MIAPVHSISA
GLDYPGVGPE HSHLHDIKRA HYEGVTDDEC IEALKLTSRL EGIIPAIESS HALAYLAKLC
PTLSGKKTIV VNVSGRGDKD MNTVMGYEKG KIYG
|
|---|
| |