Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1659 |
Symbol | serB |
ID | 5407600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1634568 |
End bp | 1635194 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640873094 |
Product | phosphoserine phosphatase SerB |
Protein accession | YP_001408884 |
Protein GI | 154173959 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00929582 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATAAAGC TTTGCGTCTT TGACTTTGAC TCGACGATAA TGGACGGTGA GACGATAGAT AGTCTCGCCG GCGCTTACGG TGTGGGTGAT GAGGTATCAA AGATAACCAA AAGAGCGATG GCGGGCGAGC TTGATTTTTT CGAGAGCTTG AGTGAACGAG TCTCTTTTTT AAAAGGCATG CCCCTTGCCA TGGCACGTGA AATTTGCGAA AATTTACCGC CGATGAACGG AGCGGCGCAG CTTATAGCCG AGCTAAAAAG CAAAAATATC AGAGTCGTTA TTTTTAGCGG CGGTTTTCAT TTAGCTACGG ATGCGATGCA AAAAAAGCTA GGCTTTGACG AGAGCTTTGC AAATATCTTG CACCATAAAG ATGGCGTCCT AAGCGGCCTT GTCGGGGGCG AGATGATGTT TGGCAGCTCA AAGGGCGATA TGCTAAAACG CGTGCAAAAT TTACTAAATT TTAGCCCGAG TGAGACGATG TGTGTCGGAG ACGGTGCGAA CGATATCTCT ATGTTTGAGC GCTCAGACCT GAAAATAGCC TTTTGTGCGA AAGAAATTTT AAAAAGAGCC GCGACTCACT GCGTCGATGT AAAAGATTTA CGAGAAATTT TAAAATTTGT AAGGTAA
|
Protein sequence | MIKLCVFDFD STIMDGETID SLAGAYGVGD EVSKITKRAM AGELDFFESL SERVSFLKGM PLAMAREICE NLPPMNGAAQ LIAELKSKNI RVVIFSGGFH LATDAMQKKL GFDESFANIL HHKDGVLSGL VGGEMMFGSS KGDMLKRVQN LLNFSPSETM CVGDGANDIS MFERSDLKIA FCAKEILKRA ATHCVDVKDL REILKFVR
|
| |