| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1647 |
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| Symbol | |
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| ID | 5407098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | + |
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| Start bp | 355180 |
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| End bp | 357432 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640871798 |
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| Product | cyclic diguanylate phosphodiesterase domain-containing protein |
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| Protein accession | YP_001407634 |
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| Protein GI | 154175526 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0560963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGCTACG GGCTTGTTCA AAATCTACTC ATGCTAATCG GTCTTGGCAT TATCACGGCA
AACATCTACC GCGCGATGAT AGAGCCCGTA AATCCCAGGA TCCACTGGAT AATCGCCTGC
TTTAGCGTGC TTCTTTGGAC GGTCTGCGAG GCCTTGTGGA CACTTGAGTC AAGCGTGCTC
ATAAGGCCGC AAAGCGAGTA TGCCTATCTG AACGTCTCGT ATCTTTTGCC GATGTTTGGC
GTATTTTGCG CGGTTGGCGT CTTTCTTTTC ATAAAATTTT CAAACACCGA GGAAAAATCG
GTCGTGCTTC TTGATATCGT GAGCGTTTTA CTGTTGGTTA GCACGCTCTC ATACAGCATC
GTGGGCGACA TCGATATCCT AAAAGCCCTA AACAGCGTGA CTAGTACCGC TGCTTTGTGC
GCCATGGCTT TAAATTTCGC CATTTTGTTC ATTGTGTTAA GCGAGCTTTT TACTAGCAAC
CTGCTTTATA TCAGGGTCAG CGGCTTTTAT CTCATCGTAT TTGGGATCTT ATTTACGATG
ATAAATTTAT ACGTAGCTTA CAACAAAATC ACGATAGAAA ATTATGACTT TAGCTACTCC
TCTTTATATA TGATCCCTTT TATCATCCTC ATGATCGGCT CGTTTTATCT AAAGACCGAA
AATAAGCGCG TCACGACCGC AGACATAGGC CTGATGACCG GCTCTAAATG GCTACCTATC
ATCGCCGTTT TGCCTCTTTT GCTGCAAAGC GACTTTGGCT CGATGCTATC GCTACTGGCG
CTATTTTTCC TTGTTTCAAA TGCACTTATC AGCTACTACA TCAAAAGCGC GATGGCTAGT
AAAAAGATGC TAGAACACGA GAAAATTTTA CATCAGGAGA TGGAAAAGCT CGTGCATGAG
CGTACGAACG AGCTCATGCT TGCGAATTTA AGGCTTCAAG ACATATCGGA CAAAGACTAT
CTCACCGGGC TTGGCAGCAG GAGCTTTTTG ATGAACGAGC TAAAAAGAGC GAGCGATGAG
CTGCAAGCAA ATGAGGAGCT GGCAGTTTAT TACATCAACA TAAGCCACTT TAAAGCCATA
AACGCCTCAT ACGGCCACGA GGTCGGAGAT AAAATTTTAA AGACCGCAGC CAGGAGGATA
ACTGGCATCT GCAACAGGCA AGAGACTACG GCCAGGATAG GTGCGGACGA GTTTATCGTG
ATATCTAAAA TGGAGCTTGG TAGCGAGACT AAGCGCATGA AATTTGGCAT CTCGCTAAAG
GACGCGATAG AAGAGCCTAT GCAAATAGAT CGTTATCACT TTGCCATAAA ATGCGTCATA
GGCATACATA TCGTCACGCA AAAGAGCAAG GCCGAGCCTA GAGCCATCAT CAAAAATGCC
GATAGGGCGA TGTATTACGC CAAAGAAAAT CCCGCCTCAA ACCCGATGGT CTATAACGAC
GAGATAGACA ACAAGATACA TCTTGACTCG ATGCTTGAGA TCGCGCTTAG AAAGGCGAAT
TTACAAAAAG ATTTTCAGAT GTATTTTCAA CCCGTCTTTG ACCTGGATAC ATCAAGGATC
GTTTGCGCAG AGGCGCTGCT TAGGTGGTAT TCAAAAGACT ACGGGCTAAT GGAGGCGAGC
GATTTTATGG GTATAGCTAG AGGCAGCGGC GATATACTAA ACTCCATTTG CATGAACGCG
ACTCTAAAGA CGGTCGAGCA TGTCAGCCGC TGGAAAAAAG ACATGCTAAA TATCCCTAAA
ATCAGCATAA ATGTGGCTAC GACGCAGAGT ACGTCTGAAA ATTTCATACA CAGCTTTTTG
CAGATGACAA AAAATTTTGG CGTGAGCCCG AGATCTTTCG AGCTTGAATT TTGCGAAGTG
CTGTGGATGA ACCCACCTGA AATTTTAGAT AAAATTTTCG AGCTTTTAAA AAGCAACGAG
ATAGACGTTT GTATCGATGA TTTTGGCTCA GGCTACACAT CGCTTATGTA TATCAGAAAA
TACAGCATAA ACCGCCTGAA AATAGCAGCC GACTTCGTCA CCCAGATGGC ATTTAGCAAG
ATAGACGCGC AAATCGTCGC TGGCATAATC AATCTGGCAA ATTCCATGAA GCTCACGAGT
GCGGCTAAGG GCGTGCAGGA TGTTGAAATT TTAGATGAGC TAAGGCAGCT AAAGTGCAAG
GAAGGGCAGG GATACTATCT GGCTCGTCCG ATGAGCGCGG AAGAATTTGA GGAATTTTTA
AGACAAAATC CTCAAATCAT AAATGCGGTT TAA
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| Protein sequence | MGYGLVQNLL MLIGLGIITA NIYRAMIEPV NPRIHWIIAC FSVLLWTVCE ALWTLESSVL
IRPQSEYAYL NVSYLLPMFG VFCAVGVFLF IKFSNTEEKS VVLLDIVSVL LLVSTLSYSI
VGDIDILKAL NSVTSTAALC AMALNFAILF IVLSELFTSN LLYIRVSGFY LIVFGILFTM
INLYVAYNKI TIENYDFSYS SLYMIPFIIL MIGSFYLKTE NKRVTTADIG LMTGSKWLPI
IAVLPLLLQS DFGSMLSLLA LFFLVSNALI SYYIKSAMAS KKMLEHEKIL HQEMEKLVHE
RTNELMLANL RLQDISDKDY LTGLGSRSFL MNELKRASDE LQANEELAVY YINISHFKAI
NASYGHEVGD KILKTAARRI TGICNRQETT ARIGADEFIV ISKMELGSET KRMKFGISLK
DAIEEPMQID RYHFAIKCVI GIHIVTQKSK AEPRAIIKNA DRAMYYAKEN PASNPMVYND
EIDNKIHLDS MLEIALRKAN LQKDFQMYFQ PVFDLDTSRI VCAEALLRWY SKDYGLMEAS
DFMGIARGSG DILNSICMNA TLKTVEHVSR WKKDMLNIPK ISINVATTQS TSENFIHSFL
QMTKNFGVSP RSFELEFCEV LWMNPPEILD KIFELLKSNE IDVCIDDFGS GYTSLMYIRK
YSINRLKIAA DFVTQMAFSK IDAQIVAGII NLANSMKLTS AAKGVQDVEI LDELRQLKCK
EGQGYYLARP MSAEEFEEFL RQNPQIINAV
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